Bugenhagen SM, Cowley AW Jr, Beard DA. Identifying physiological origins of baroreflex dysfunction in salt-sensitive hypertension in the Dahl SS rat. Physiol Genomics 42: 23-41, 2010. First published March 30, 2010 doi:10.1152/physiolgenomics.00027.2010.-Salt-sensitive hypertension is known to be associated with dysfunction of the baroreflex control system in the Dahl salt-sensitive (SS) rat. However, neither the physiological mechanisms nor the genomic regions underlying the baroreflex dysfunction seen in this rat model are definitively known. Here, we have adopted a mathematical modeling approach to investigate the physiological and genetic origins of baroreflex dysfunction in the Dahl SS rat. We have developed a computational model of the overall baroreflex heart rate control system based on known physiological mechanisms to analyze telemetry-based blood pressure and heart rate data from two genetic strains of rat, the SS and consomic SS.13 BN , on low-and high-salt diets. With this approach, physiological parameters are estimated, unmeasured physiological variables related to the baroreflex control system are predicted, and differences in these quantities between the two strains of rat on low-and high-salt diets are detected. Specific findings include: a significant selective impairment in sympathetic gain with high-salt diet in SS rats and a protection from this impairment in SS.13 BN rats, elevated sympathetic and parasympathetic offsets with high-salt diet in both strains, and an elevated sympathetic tone with high-salt diet in SS but not SS.13 BN rats. In conclusion, we have associated several important physiological parameters of the baroreflex control system with chromosome 13 and have begun to identify possible physiological mechanisms underlying baroreflex impairment and hypertension in the Dahl SS rat that may be further explored in future experimental and modeling-based investigation. computational model; baroreceptor reflex; autonomic nervous system THE DAHL SALT-SENSITIVE (SS) rat is an extensively studied model of human salt-sensitive hypertension. Consomic substitution studies involving the introgression of whole chromosomes from a salt-resistant rat strain into the isogenic background of the SS strain, congenic substitution studies involving the introgression of smaller regions of chromosomes, and other genetic studies have led to the identification of many quantitative trait loci (QTLs) associated with this disease (12, 36, 44, http://www.pga.mcw.edu). However, phenotypes collected from many of these studies often involve relatively gross measurements such as blood pressure and heart rate, which provide little information on the underlying physiology. Many protective QTLs have been shown to interact epistatically (i.e., in a nonlinear or nonadditive manner) so that these measurements are unable to distinguish various combinations of introgressed QTLs (36). It is also likely that many QTLs have been left unidentified because of these interactions. Thus, these types of measurements become dimi...