The application of biochar to strongly weathered soils is thought to supply nutrients and improve nutrient retention. We hypothesized that biochar increases (a) total N, bioavailable macronutrient (NH 4 -N, P, K, Ca, Mg), micronutrient (Fe, Mn, Zn, Cu), and plant-beneficial Na concentrations; and (b) nutrient retention in the topsoil. We grew the native leguminous Brazilian firetree [Schizolobium parahyba var. amazonicum (Ducke) Barneby] and the exotic beechwood (Gmelina arborea Roxb.) in a full factorial split-split-plot design at La Victoria and Los Zapotes, Ecuadorian Amazonia. The treatments included amendment of mineral fertilizer plus lime, 3 and 6 t ha −1 biochar (locally produced charcoal), and a control. We sampled the 0-to-0.25-and 0.25-to-0.50-m soil depth layers before the start of the experiment in 2009 and six times until 2013. The site at Los Zapotes was more fertile as reflected by a significant site effect on most studied soil properties in both depth layers. Biochar increased modified Olsen (NaHCO 3 +EDTA)-extractable Ca (p < .05) and Zn concentrations (p < .1) and total N concentrations (p < .05) in topsoil. Mineral fertilizer plus lime increased Olsen-extractable P, K, Ca, Mg, and Zn concentrations (all p < .05) but reduced Olsen-extractable Fe concentrations (p < .05) in topsoil. Biochar increased Ca (p < 0.1) and Zn (p < .05) retention in mineral fertilized topsoils but decreased total N retention (p < .05) in unfertilized topsoils. The amendment of up to 6 t ha −1 biochar did not increase the fertility of the studied degraded Amazonian Ultisols sufficiently to enhance tree growth.