Global (i.e. ocean warming) and local (i.e. land runoff) anthropogenic disturbances affect coastal coral reefs worldwide. Terrestrial runoff, leading to reduced light and increased nutrient availability, may have interactive effects with ocean warming in promoting shifts in benthic communities. Because microbial biofilms rapidly reflect environmental changes, we investigated the quantitative (C, N and chlorophyll a contents) and qualitative (microbial community composition) parameters and metabolic responses (O 2 fluxes) of biofilms established on glass slides to combinations of manipulated water temperatures (26, 29 and 31°C) ) in a 28 d flow-through aquarium experiment. The findings revealed that, independent of light availability, a temperature of 31°C significantly decreased the 24 h net O 2 production and all of the quantitative parameters. Under high light, additive effects of 31°C and 1.4 µM nitrate reduced the 24 h net O 2 production. Terminal restriction fragment length polymorphisms (T-RFLP) of 16S rRNA genes showed light-independent temperature-induced microbial community shifts driven by increases in the relative abundance of Oceanospirillum (Gammaproteobacteria) and decreases of Cyanobacteria. The relative abundances of diatom plastids increased in response to elevated nitrate only in high-lightexposed biofilms. Overall, high temperatures altered microbial biofilm community composition, biomass and productivity. Under predicted near-future inner reef scenarios (low light and high nitrate availability), biofilms become light-limited through sedimentation, while outer (high light and low nitrate availability) inshore reef biofilms remain nitrate-limited. Understanding the interactive effects of environmental changes on microbial biofilm communities may contribute to bioindicator development and improved coastal management strategies for coral reefs. Coral reefs harbour abundant microorganisms that predominantly exist as surface-attached communities (Costerton et al. 1995, Crump et al. 1998, Teske & Wooldridge 2001. Surface-colonising biofilms are complex communities comprising macromolecules and microorganisms embedded in an extracellular polymeric matrix (Mihm et al. 1981). These highly dynamic microbial biofilm communities respond rapidly to and are integrative of changing ambient environmental conditions (Paerl & Pinckney 1996, Snyder et al. 2005. Microbial biofilm communities also contribute significantly to biogeochemical nutrient cycling in aquatic ecosystems, such as coral reefs (Battin et al. 2003), and influence the settlement and metamorphosis of important reef building organisms, such as corals, therefore affecting the establishment, recovery and resilience of coral reefs (Wieczorek & Todd 1998, Webster et al. 2004). The immense surface area available for biofilm colonisation and development highlights the important contribution of biofilms to coral ecosystem functioning.Coral bleaching is promoted by increased SST (Hoegh-Guldberg 1999), and these effects may be exacerbated by ele...