Wolbachia
is one of the most common endosymbionts found infecting arthropods. Theory predicts symbionts like
Wolbachia
will be more common in species radiations, as host shift events occur with greatest frequency between closely related species. Further, the presence of
Wolbachia
itself may engender reproductive isolation, and promote speciation of their hosts. Here we screened 178 individuals belonging to 30 species of the damselfly genera
Nesobasis
and
Melanesobasis
— species radiations endemic to the Fiji archipelago in the South Pacific — for
Wolbachia
, using multilocus sequence typing to characterize bacterial strains. Incidence of
Wolbachia
was 71% in
Nesobasis
and 40% in
Melanesobasis
, and prevalence was also high, with an average of 88% in the
Nesobasis
species screened. We identified a total of 25
Wolbachia
strains, belonging to supergroups A, B and F, with some epidemic strains present in multiple species. The occurrence of
Wolbachia
in both males and females, and the similar global prevalence found in both sexes rules out any strong effect of
Wolbachia
on the primary sex-ratio, but are compatible with the phenotype of cytoplasmic incompatibility.
Nesobasis
has higher species richness than most endemic island damselfly genera, and we discuss the potential for endosymbiont-mediated speciation within this group.