2016
DOI: 10.1038/srep38705
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Biological marks of early-life socioeconomic experience is detected in the adult inflammatory transcriptome

Abstract: Consistent evidence is accumulating to link lower socioeconomic position (SEP) and poorer health, and the inflammatory system stands out as a potential pathway through which socioeconomic environment is biologically embedded. Using bloodderived genome-wide transcriptional profiles from 268 Italian participants of the European Prospective Investigation into Cancer and Nutrition (EPIC) cohort, we evaluated the association between early life, young and later adulthood SEP and the expression of 845 genes involved … Show more

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Cited by 47 publications
(36 citation statements)
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“…Additionally, the relative risks were assumed to be the same for all EDI quintiles. There is nevertheless an increasing body of literature suggesting that socioeconomic factors are biologically embodied and associated with different levels of epigenetic markers that in turn may be associated with higher risk of diseases including cancer in the lower SEP . It is thus possible that the effect of the same level of tobacco smoking on cancer incidence may be higher in lower socioeconomic groups and that we slightly underestimated the number of cancer cases attributable to smoking in the more deprived EDI quintiles.…”
Section: Discussionmentioning
confidence: 87%
“…Additionally, the relative risks were assumed to be the same for all EDI quintiles. There is nevertheless an increasing body of literature suggesting that socioeconomic factors are biologically embodied and associated with different levels of epigenetic markers that in turn may be associated with higher risk of diseases including cancer in the lower SEP . It is thus possible that the effect of the same level of tobacco smoking on cancer incidence may be higher in lower socioeconomic groups and that we slightly underestimated the number of cancer cases attributable to smoking in the more deprived EDI quintiles.…”
Section: Discussionmentioning
confidence: 87%
“…Statistical significance of the effect of the variable of interest was evaluated using the p ‐value of likelihood ratio test comparing the model with and without that variable . We corrected for multiple testing using a permutation‐based approach estimating the per‐test significance level to be applied to control the family wise error rate (FWER) .…”
Section: Methodsmentioning
confidence: 99%
“…As detailed in the Supporting Information, we ran a series of linear mixed models for each disease‐related adduct and each of the 2,670 smoking‐related CpG, setting the methylation level as the variable of interest. These models also accounted for technical variation in the methylation data using a two‐step strategy first estimating, and second removing technically‐induced shifts in measured methylation levels . Results from these analyses were visualized as a bipartite network where edges were selected based on statistical significance of the pairwise associations, correcting for 2,670 tests.…”
Section: Methodsmentioning
confidence: 99%
“…To adjust results from all PLS analyses for technically induced variation, and as already proposed,25, 26 we inferred de‐noised data from the linear mixed model presented above by subtracting from the observations the estimated random effects.…”
Section: Methodsmentioning
confidence: 99%