The Bombyx mori nucleopolyhedrovirus
(BmNPV), a foodborne infectious virus, is the pathogen causing nuclear
polyhedrosis and high lethality in the silkworm. In this study, we
characterized the molecules involved in BmNPV–silkworm interaction
by RNA sequencing of the fat body isolated from the virus-susceptible
strain P50. Kyoto Encyclopedia of Genes and Genomes (KEGG) annotation
showed that the upregulated differentially expressed genes (DEGs)
were mainly involved in translation, signal transduction, folding,
sorting, and degradation, as well as transport and catabolism, while
the downregulated DEGs were predominantly enriched in the metabolism
of carbohydrates, amino acids, and lipids at 72 h post BmNPV infection.
Knockout of the upregulated somatomedin-B and thrombospondin
type-1 domain-containing protein, probable allantoicase, trifunctional purine biosynthetic protein adenosine-3, and Psl and pyoverdine operon regulator inhibited
the proliferation of BmNPV, while knockout of the downregulated clip domain serine protease 3 and carboxylesterase
clade H, member 1 promoted it. The molecules herein identified
provide a foundation for developing strategies and designing drugs
against BmNPV.