The low-energy collision-induced dissociation product ion spectra of protonated beta-blockers reveal an analogy to fragmentation under electron ionisation conditions", J. Mass Spectrom. 2011Spectrom. , 1182Spectrom. -1185 S.W. Holman, P. Wright, N.J. Wells and G.J. Langley, "Evidence for site-specific intra-ionic hydrogen/deuterium exchange in the low-energy collision-induced dissociation product ion spectra of protonated small molecules generated by electrospray ionisation" J. Mass Spectrom. 2010, 45, 347-357 Abstract S-oxidation is a common metabolic route for sulphur containing compounds. When studying the fragmentation of some chemically synthesised sulphoxides, two unexpected losses of 62 m/z units were observed in the collision-induced dissociation (CID) product ion spectrum protonated 3-dimethylaminomethyl-4-(4-methanesulfinyl-3-methyl-phenoxy)-benzenesulfonamide. A single loss was initially assigned using the low resolution product ion spectrum, acquired by electrospray ionisation-quadrupole ion trap-mass spectrometry (ESI-QIT-MS), as methanethial, S-oxide with the dissociation proceeding via a charge-remote, four-centred rearrangement. This assignment was consistent with well-documented hydrogen rearrangements in the literature. Further, the loss was not observed for the parent compound. Thus, it was inferred that the site of metabolism was involved in the dissociation and the attractive nature of the four-centred rearrangement meant that the loss of methanethial, Soxide was a logical assignment. However, deuterium labelling experiments and accurate mass measurements, performed using electrospray ionisation-Fourier Transform Ion Cyclotron Resonance-mass spectrometry (ESI-FTICR-MS), showed that two distinct losses of 62 m/z units occur, neither of which was of that initially hypothesised from the low resolution product ion spectrum of the protonated molecule. Mechanisms consistent with the experimental findings are postulated. An MS 3 spectrum of the fully exchanged, deuterated species supported the proposed mechanisms by suggesting that 3-dimethylaminomethyl-4-(4-methanesulfinyl-3-methyl-phenoxy)-benzenesulfonamide has multiple sites of protonation in the gas phase. The planar structures of the posited product ions are likely to provide the driving force for the rearrangements. The relevance of the observations with regards to pharmaceutical drug metabolite identification are discussed.