Ϫ transport properties of the corneal endothelium. Recent work (13) suggested the presence of an apical 1Na ϩ -3HCO 3 Ϫ cotransporter (NBC1) in addition to a basolateral 1Na ϩ -2HCO 3 Ϫ cotransporter. We examined whether the NBC1 cotransporter contributes significantly to basolateral or apical HCO 3 Ϫ permeability and whether the cotransporter participates in transendothelial net HCO 3 Ϫ flux in cultured bovine corneal endothelium. NBC1 protein expression was reduced using small interfering RNA (siRNA). Immunoblot analysis showed that 5-15 nM siRNA decreased NBC1 expression by 80 -95%, 4 days posttransfection. Apical and basolateral HCO 3 Ϫ permeabilities were determined by measuring the rate of pHi change when HCO 3 Ϫ was removed from the bath under constant pH or constant CO2 conditions. Using either protocol, we found that cultures treated with NBC1 siRNA had sixfold lower basolateral HCO 3 Ϫ permeability than untreated or siCONTROL siRNA-treated cells. Apical HCO 3 Ϫ permeability was unaffected by NBC1 siRNA treatment. Net non-steady-state HCO 3 Ϫ flux was 0.707 Ϯ 0.009 mM ⅐ min Ϫ1 ⅐ cm 2 in the basolateral-to-apical direction and increased to 1.74 Ϯ 0.15 when cells were stimulated with 2 M forskolin. Treatment with 5 nM siRNA decreased basolateral-to-apical flux by 67%, whereas apical-to-basolateral flux was unaffected, significantly decreasing net HCO 3 Ϫ flux to 0.236 Ϯ 0.002. NBC1 siRNA treatment or 100 M ouabain also eliminated steady-state HCO 3 Ϫ flux, as measured by apical compartment alkalinization. Collectively, reduced basolateral HCO 3 Ϫ permeability, basolateral-to-apical fluxes, and net HCO 3 Ϫ flux as a result of reduced expression of NBC1 indicate that NBC1 plays a key role in transendothelial HCO 3 Ϫ flux and is functional only at the basolateral membrane. corneal endothelium; sodium bicarbonate cotransporter; small interfering RNA; bicarbonate transport THE ION AND FLUID TRANSPORT PROPERTIES of the corneal endothelium are responsible for maintaining the hydration and transparency of the cornea. Corneal endothelial fluid transport requires the presence of HCO 3 Ϫ (15, 18, 29) and Cl Ϫ (44), is sensitive to carbonic anhydrase inhibitors (19,22,29), and is completely eliminated by ouabain, a Na ϩ -K ϩ -ATPase inhibitor. Net stroma to anterior chamber HCO 3 Ϫ flux is responsible for the measured short-circuit current and the small, negative transendothelial potential (19), suggesting that HCO 3 Ϫ is the primary secreted anion. Although significant progress has been made in identifying and locating plasma membrane transporters in the corneal endothelium, the contribution of the transporters to net HCO 3 Ϫ transport is largely unknown. In this study we have examined the role of the sodium bicarbonate cotransporter (NBC1) in transendothelial HCO 3 Ϫ transport. Previous studies have shown that the uptake of HCO 3 Ϫ across the basolateral membrane of corneal endothelial cells occurs by a potent Na ϩ -dependent, Cl Ϫ -independent, DIDSsensitive, and electrogenic Na ϩ -2HCO 3 Ϫ cotransporter (5, 8, 21...