2022
DOI: 10.1128/cmr.00140-21
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Candidate Phyla Radiation, an Underappreciated Division of the Human Microbiome, and Its Impact on Health and Disease

Abstract: Candidate phyla radiation (CPR) is an emerging division of the bacterial domain within the human microbiota. Still poorly known, these microorganisms were first described in the environment in 1981 as “ultramicrobacteria” with a cell volume under 0.1 μm 3 and were first associated with the human oral microbiota in 2007.

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Cited by 27 publications
(38 citation statements)
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“…Diets that are imbalanced by being low in complex polysaccharides (and therefore, based on carbohydrates) and rich in protein intake can change the composition of the gut microbiota by decreasing the percentages of Bacteroidetes (B) over Firmicutes (F), leading to irregular saccharolytic fermentation [ 13 ]. This imbalance in the microbial ecosystem is called dysbiosis, defined by the altered representation of Phyla percentages [ 14 ]. Dysbiosis can lead to the numerical expansion of some/certain potentially pathogenic commensal bacterial species.…”
Section: Introductionmentioning
confidence: 99%
“…Diets that are imbalanced by being low in complex polysaccharides (and therefore, based on carbohydrates) and rich in protein intake can change the composition of the gut microbiota by decreasing the percentages of Bacteroidetes (B) over Firmicutes (F), leading to irregular saccharolytic fermentation [ 13 ]. This imbalance in the microbial ecosystem is called dysbiosis, defined by the altered representation of Phyla percentages [ 14 ]. Dysbiosis can lead to the numerical expansion of some/certain potentially pathogenic commensal bacterial species.…”
Section: Introductionmentioning
confidence: 99%
“…This was supported by the sequencing results which con rmed that different species of Candidatus Saccharibacteria could be found. Indeed, studies have previously established that the same host can be host to different Candidatus Sacchairbacteria 10,14 .…”
Section: Discussionmentioning
confidence: 99%
“…Open reading frames (ORFs) were predicted using Prokka 41 for each of the genomes studied. In order to show the mosaicism of these two described genome, we constructed a rhizomal representation of each genome, as a previously described 10,42,43 . This representation shows the origin of each amino acid sequences and determine the possible lateral gene transfer between our CPR genomes and other microbes 43 .…”
Section: Genome Annotation and Genes Predictionmentioning
confidence: 99%
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“…Interest in human microbiome-associated Saccharibacteria, Gracilibacteria, and Absconditabacteria (hereafter referred to as SGA) has increased, in part due to their association with disease 1 . SGA are lineages within the Candidate Phyla Radiation (CPR), a monophyletic radiation within domain Bacteria, and are characterized in part by their consistently reduced genomes, small cell sizes, and limited metabolic capabilities 2 .…”
Section: Introductionmentioning
confidence: 99%