Capercaillie (Tetrao urogallus L.), a territorial galliform species, is known to prefer mature conifer stands with canopy gaps and a vigorous understory of ericaceous species. Capercaillie is a useful umbrella species that has recently shown declining population trends and distribution changes in its southern geographic range. We aim to identify and assess the possible changes in summer capercaillie habitat selection between 2001 and 2011 in the Scanuppia Natura 2000 site (south-eastern Alps). The area is dominated by spruce (Picea abies (L.) Karsten) forests, followed by mixed forests, scrub, and open habitats. In both years, summer presence–absence of capercaillie was verified through the detection of droppings over 10 m radius circular plots located along contour lines (1500–1800 m). A set of environmental and habitat features was also surveyed. While overall population numbers remain unchanged over the surveyed period, results have shown an altitudinal shift in capercaillie distribution. Habitat variables had a stronger effect on the presence of capercaillie in 2001 than in 2011. Land cover and climate change are likely among the drivers of the shift in altitudinal distribution. This confirms the relevance of habitat restoration actions and to monitor changes in factors explaining capercaillie habitat selection.