The development of organic molecules
to target nucleic acid is
an active area of research at the interface of chemistry and biochemistry,
which involves DNA binding, nuclear imaging, and antitumor studies.
These molecules bind with DNA through covalent interactions, electrostatic
interactions, or intercalation. However, they are less permeable to
membrane, and they have a significant cytotoxicity, which limits their
application under in vivo conditions. In the present work, various
mono- and disubstituted 1,8-naphthalimides-based derivatives (
S-12
,
S-13
,
S-15
, and
S-21
) have been synthesized and characterized through various spectroscopic
techniques. Among these, 3-amino-4-bromo-1,8-naphthalimide (
S-15
) was found to have an attractive water solubility and
act as a nuclear imaging agent. The spectroscopic absorption and emission
data showed that
S-15
has a strong affinity for salmon
sperm DNA with a binding constant of 6.61 × 10
4
M
–1
, and the ratiometric fluorescence intensity (
I
489
/
I
552
) of
S-15
has a linear relationship in the 0–50 μM
range of DNA concentrations. It intercalates with DNA through the
hydrophobic planar naphthalimide core as confirmed through cyclic
voltammetry, circular dichroism,
1
H NMR titration, and
thermal denaturation studies. Positively charged amine groups also
participate in H-bonding with the bases and backbone of DNA. The
S-15
intercalator showed a large Stokes shift and photostability,
which made it attractive for direct imaging of
Legionella
pneumophila
, without the need for a prior membrane
permeabilization.