Pigmentation patterning has long interested biologists, integrating topics in ecology, development, genetics, and physiology. Wild-type neonatal larvae of the silkworm,
Bombyx mori
, are completely black. By contrast, the epidermis and head of larvae of the homozygous recessive sex-linked chocolate (
sch
) mutant are reddish brown. When incubated at 30 °C, mutants with the
sch
allele fail to hatch; moreover, homozygous mutants carrying the allele
sch lethal
(
sch
l
) do not hatch even at room temperature (25 °C). By positional cloning, we narrowed a region containing
sch
to 239,622 bp on chromosome 1 using 4,501 backcross (BC1) individuals. Based on expression analyses, the best
sch
candidate gene was shown to be tyrosine hydroxylase (
BmTh
).
BmTh
coding sequences were identical among
sch
,
sch
l
, and wild-type. However, in
sch
the ∼70-kb sequence was replaced with ∼4.6 kb of a Tc1-mariner type transposon located ∼6 kb upstream of
BmTh
, and in
sch
l
, a large fragment of an L1Bm retrotransposon was inserted just in front of the transcription start site of
BmTh
. In both cases, we observed a drastic reduction of
BmTh
expression. Use of RNAi with
BmTh
prevented pigmentation and hatching, and feeding of a tyrosine hydroxylase inhibitor also suppressed larval pigmentation in the wild-type strain,
pnd
+
and in a
pS
(black-striped) heterozygote. Feeding L-dopa to
sch
neonate larvae rescued the mutant phenotype from chocolate to black. Our results indicate the
BmTh
gene is responsible for the
sch
mutation, which plays an important role in melanin synthesis producing neonatal larval color.