This paper develops a conceptual framework for addressing questions about reproduction, individuality, and the units of selection in symbiotic associations, with special attention to the origin of the eukaryotic cell. Three kinds of reproduction are distinguished, and a possible evolutionary sequence giving rise to a mitochondrion-containing eukaryotic cell from an endosymbiotic partnership is analyzed as a series of transitions between each of the three forms of reproduction. The sequence of changes seen in this "egalitarian" evolutionary transition is compared with those that apply in "fraternal" transitions, such as the evolution of multicellularity in animals.symbiosis | evolution | reproduction | eukaryote S ymbiosis raises general questions about evolution, cooperation, and "individuality" in living systems. These issues arise in especially important forms in the context of endosymbiotic theories of the evolution of the eukaryotic cell. This family of theories holds that the origins of the mitochondrion lie in a transition that began with the engulfing of a bacterium by an archaeon. The bacterium became first an endosymbiont and eventually an organelle, often playing an essential role in the metabolism of the larger cell. A similar sequence occurred in the history of plastids in photosynthetic eukaryotes, including the lineage leading to land plants (1-4). The endosymbiotic theory holds that the evolutionary transition that produced the eukaryotic cell was one in which a new kind of biological individual arose from the combination and integration of others (5).This paper develops a conceptual framework for addressing questions about individuality as they arise in symbiotic associations, with the eukaryotic cell as a central case. It does so by focusing especially on reproduction, an evolutionary phenomenon that is reshaped repeatedly in evolutionary transitions. Existing frameworks used in this area often treat reproduction and evolution in purely genetic terms (6). However, all objects that can form parentoffspring lineages can evolve in a Darwinian manner if further conditions are met. Symbiotic associations and the transitions they undergo motivate the development of a general treatment of reproduction, covering diverse kinds of parent-offspring lineages and distinguishing between biological objects that do form such lineages and those that do not. Although this paper is informal, the treatment of reproduction is intended to complement abstract multilevel models of Darwinian evolution, especially those based on the Price equation (7). The paper's framework embraces the importance of intermediate cases and movement between categories.