A ntimicrobial resistance (AMR) in Neisseria gonorrhoeae, the causative agent of the disease gonorrhea, is a major public issue and is now recognized by the U.S. Centers for Disease Control and Prevention (CDC) as one of the top three urgent AMR threats (1). Action plans to control the impact and spread of N. gonorrhoeae AMR have been released by the World Health Organization (WHO) and CDC (2, 3), and prominent among the listed recommendations is the need to improve AMR surveillance capabilities. Conventional N. gonorrhoeae AMR surveillance is performed by bacterial culture. However, bacterial culture has several major limitations, including the need for stringent sample handling and transport systems to maintain viable organisms, which are problems in remote and resource-limited settings. In addition, nucleic acid amplification tests (NAATs) are increasingly commonplace in the diagnosis of gonococcal infections in both remote and urban settings, which in turn are seeing further reductions in the use of bacterial culture and widening gaps in AMR data. For these reasons, there has been an increasing need for the development of molecular methods to enhance AMR surveillance activity (4). We recently described a real-time PCR method to detect penicillinase-producing N. gonorrhoeae (PPNG) directly within clinical samples (5). The method acts as an indirect marker for PPNG by targeting a region of DNA on the gonococcal plasmids carrying the penicillinase gene but not the penicillinase gene itself. The original evaluations of this PPNG-PCR showed 100% sensitivity and 98.7% specificity compared to bacterial culture for detecting PPNG strains in clinical specimens (5). However, a more recent evaluation of the assay revealed a variant plasmid type, now called the Australian plasmid, which was negative by . In brief, we tested 342 PPNG isolates from throughout Australia from the year 2012 and found one isolate that was negative by PPNG-PCR. DNA sequencing revealed a novel 1,885-bp deletion (corresponding to nucleotides 502 to 2385 of the Asian plasmid type, GenBank accession no. U20374), which included the region targeted by the PPNG-PCR (937 to 1024 bp) and hence accounted for the false-negative result. Several different gonococcal plasmids with various different deletions and insertions have now been described and named according to the geographical location of their initial discovery; these include the Asian (7,426 bp), African (5,599 bp), Rio de Janeiro/Toronto (5,154 bp), Nimes (6,798 bp), New Zealand (9,309 bp), Johannesburg (4,865 bp), and now the Australian (3,629 bp) plasmids (6-8).While our initial data suggest that the Australian plasmid may be rare in local gonococci, we sought to rectify the PPNG-PCR to account for this plasmid, particularly given that the PPNG-PCR is now used as a routine tool to inform gonorrhea treatment guidelines in remote parts of Australia where penicillin-based treatments are still used (9). In doing so, we aimed to limit the potential for false-negative results caused by further unrec...