cral melanoma is a rare melanocytic tumor that arises on the non-hair-bearing skin of the palms, soles, and nail beds. 1 Unlike cutaneous melanoma, acral melanoma is not linked to UV radiation exposure; it exhibits a much lower point mutation burden than cutaneous melanoma but a higher frequency of structural variants and copy number alterations. 2,3 The incidence of acral melanoma is uniform across all populations, making it the most common melanoma subtype in individuals of African, Asian, and Hispanic descent. 1 Acral melanomas differ in their mutational profiles from cutaneous melanomas, with a lower incidence of BRAF mutations (18%) and NF1 mutations (11%) and the presence of mutations in TYRP1 (8%) and NOTCH2 (4%) and amplification/ mutation in the receptor tyrosine kinase c-KIT (approximately 2%-3%). 3 Acral melanomas with BRAF mutations harbor fewer genomic amplifications and are more common in patients with European ancestry, possibly constituting a unique subset. 4 Melanocytic nevi are benign proliferations of melanocytes; melanomas sometimes arise in a small proportion of melanocytic nevi. [5][6][7] Genomic analyses have shown that 100% of nevi on sun-exposed skin harbor mutually exclusive mutations in melanoma driver oncogenes, such as BRAF and NRAS. [8][9][10] Although the development of nevi has been linked to sun exposure, 10,11 they can also arise on skin with low levels of UV radiation exposure, such as the palms and soles. At this time, little is known about the mutational profiles of acral nevi, which arise on skin with little UV radiation exposure.
Methods
Patient SamplesThis study was approved by the University of South Florida institutional review board (protocol No. PRO00036516). Deidentified archival samples were collected under a waiver of informed consent under the Common Rule (45 CFR 46). After institutional review board approval, the pathology databases at 2 institutions were queried for a diagnosis containing the words melanocytic nevus at any acral location (palm, sole, finger, toe, foot, hand). Slides were reviewed and diagnoses verified by the study pathologist (J.L.M.); 49 of 50 cases with greater than 10% nevus cellularity and 1 case with 5% nevus cellularity were submitted for analysis.
DNA SequencingTargeted DNA sequencing was performed on 151 cancerassociated genes (eTable 1 in the Supplement) (Agilent Sure-Select XT ClearSeq Comprehensive Cancer Panel). For each sample, 75-base paired-end sequence reads were generated IMPORTANCE Acral skin may develop nevi, but their mutational status and association with acral melanoma is unclear.OBJECTIVE To perform targeted next-generation sequencing on a cohort of acral nevi to determine their mutational spectrum.DESIGN, SETTING, AND PARTICIPANTS Acral nevi specimens (n = 50) that had been obtained for diagnostic purposes were identified from the pathology archives of a tertiary care academic cancer center and a university dermatology clinic. Next-generation sequencing was performed on DNA extracted from the specimens, and mutations calle...