Iron limitation and the expression of mycobactin and carboxymycobactin by Mycobacterium tuberculosis are known. Here, we report how iron regulated the coordinate expression of these two siderophores and a 28-kDa cell wall-associated iron-regulated protein (Irep-28). Irep-28 is identified as the DNA-binding HU homologue HupB protein (hupB [Rv2986c]). Antibodies to this protein were detected in sera from tuberculosis patients. The location of the protein in the cell wall makes it a potential drug target.Iron limitation in mycobacteria results in the expression of two siderophores: the intracellular hydrophobic mycobactin and the extracellular water-soluble carboxymycobactin/exochelin (18,26). In Mycobacterium smegmatis, a 29-kDa ironregulated envelope protein (IREP) was shown to associate directly in vitro with ferri-exochelin, and the addition of a polyclonal antiserum generated against it significantly inhibits ferri-exochelin-mediated iron uptake by live organisms (9). This was the first evidence of a ferric-siderophore receptor in mycobacteria. In Mycobacterium neoaurum, iron coordinately regulated the levels of mycobactin, exochelin, and a 21-kDa envelope protein (24).Calder and Horwitz showed the iron-regulated expression of Irp10 and Mta72 in Mycobacterium tuberculosis by single-dimension electrophoresis (3) and later, using two-dimensional gel electrophoresis combined with mass spectrometry and sequence information (27), demonstrated the upregulation of a putative cation transporting ATPase, a mycobacterial homologue of phosphoenolpyruvate carboxykinase, and an NADPdependent dehydrogenase in bacteria grown in low-iron medium, whereas these authors observed increased levels of FurA, a homologue of EF-Tu, and an aconitase in iron-rich medium.Microarray analysis revealed a large number (n Ï 155) of iron-regulated genes (20). Studies on the role of the iron regulator IdeR, in both iron acquisition and oxidative stress (8,20), and the presence of homologues of both Fur (FurA and FurB) and DtxR (IdeR and SirR) in the M. tuberculosis genome (5) show that iron-dependent regulation in mycobacteria is complex and much remains to be understood.Although there is no direct evidence of mycobactin/carboxymycobactin in in vivo derived mycobacteria, mycobactin was shown to be a virulence determinant by De Voss et al., who demonstrated that mutants defective in mycobactin synthesis failed to infect and multiply within macrophages (6, 7). Ironregulated proteins are expressed by Mycobacterium avium and Mycobacterium leprae isolated from experimentally infected animals (25). Since the availability of iron is one of the contributing factors in determining the outcome of a bacterial infection, it is likely that they adapt with a great deal of fineness to changes in iron levels in their immediate environment.In the present study, we studied the expression of mycobactin, carboxymycobactin, and envelope proteins in M. tuberculosis grown in a range of iron concentrations. With due emphasis on the importance of sample preparation and...