ABSTRACT:We studied the mesoscopic structure of the perfluorinated sulfonic acid membrane Nafion containing water using a dissipative particle dynamics (DPD) simulation. A Nafion polymer is modeled by connecting coarsegrained particles, which correspond to the hydrophobic backbone of polytetrafluoroethylene and perfluorinated side chains terminated by hydrophilic end particles of sulfonic acid groups. Water is also modeled by the same size particle as adopted in the Nafion model, corresponding to a group of four H 2 O molecules. The Flory-Huggins χ-parameters between DPD particles are estimated from the mixing energy calculation using an atomistic simulation. In the DPD simulation, water particles and hydrophilic particles of Nafion side chains spontaneously form aggregates and are embedded in the hydrophobic phase of the Nafion backbone. This structure is a bicontinuous phase of Nafion and water regions and has a continuous path in the cavity of water in any direction. Although this sponge-like structure is essentially identical to the cluster-network model proposed from the experimental studies, the shape of the water clusters is not spherical but irregular, and the water regions are indistinguishable structures of water clusters and their channels. The cluster size and its dependence on the water content are in good agreement with experimental reports; therefore, the simulated mesoscopic structure is confirmed to be a highly possible one.KEY WORDS Computer Simulation / Dissipative Particle Dynamics / Polyelectrolyte Membrane / Mesoscopic Structure / Morphology / Nafion Membrane / Water Cluster / The well-known perfluorinated sulfonic acid membranes Nafion are the most common membrane materials used in the polymer electrolyte fuel cell because of their exceptional chemical, thermal and mechanical stability in addition to their reasonable proton conductivity. A Nafion polymer consists of a polytetrafluoroethylene backbone and perfluorinated pendant side chains terminated by sulfonic acid groups. The general molecular structure of Nafion polymer is 1where n is approximately 5-14, and m is 200-1000. To investigate the structure and swelling behavior of the hydrated Nafion membranes, numerous experimental efforts have been concentrated on neutron, wide and small angle X-ray scattering, infrared (IR) and Raman spectroscopy, and transmission electron microscopy (TEM) techniques. 1-13 It has been well established that hydrated Nafion membranes have two phases on a nanometer scale, a hydrophobic phase containing the backbone and a hydrophilic phase containing sulfonic acid groups and water. Several models for these structures such as the interconnected spherical water clusters (the cluster-network model) have been proposed for the interpretation of the scattering patterns. 1-7 However, these models are still under discussion concerning the size and shape of the water clusters. It is meaningful to clarify the structure of the membranes for analytical study and to improve the mechanical and transport properties of the m...