The Focused Ion Beam (FIB) instrument has been utilized for site-specific specimen preparation for a wide range of analytical techniques due to its ability to achieve high spatial resolution imaging, milling, and deposition [1,2]. The understanding of FIB damage is important to ensure that the region being analyzed is indeed representative of the material, and is not due to a specimen preparation artifact. The interaction between the incident ions (e.g., Ga + ) and the target material during FIB operation (e.g., imaging or milling mode) may lead to surface damage and consequently limit the ability to achieve high quality high-resolution TEM images. Amorphization of a FIB milled crystalline surface may occur due to sufficient atom displacement within the collision cascade resulting in the loss of long-range order when the density of point defects reaches a critical value [3]. Redeposition of sputtered atoms has also been reported as a result of FIB milling [4]. The propensity for redeposition increases when FIB milling is performed in a confined and/or a high aspect ratio trench, or when FIB conditions are used that contribute to factors that increase the sputtering rate (e.g., using a higher beam current) [5]. Observations have shown that FIB milling with Ga at an energy of 30 keV will produce amorphization damage along a Si side-wall that is ~ 28 nm thick and up to 20 wt% Ga may be present within the damage region [6]. Previous work in our lab has shown that the side-wall damage thickness in Si varies with beam current [7]. In addition, while significant amounts of Ga were observed in the side-wall damage [8], Ga was not detectable in side-wall damage when Si was FIB milled using gas assisted etching (GAE) [9]. The following study was performed in an attempt to better understand FIB damage. In this study, three square trenches (2x2 µm 2 , 4x4 µm 2 , and 6x6 µm 2 ) were FIB milled to 1 µm in depth in a (100) Si wafer using an FEI 200TEM FIB workstation equipped with a Ga liquid metal ion source and an Omniprobe in-situ W probe. An accelerating voltage of 30 keV and a beam current of 1000 pA was used to mill the trenches. The specimen was removed from the FIB and sputter-coated with Cr to preserve the FIB milled damage layers. The specimen was put back into the FIB and the trenches were filled with CVD Pt deposition using a beam current of 100 pA. A cross-section TEM specimen was prepared across the trenches using the in-situ FIB lift-out method [10]. The specimen was observed using a Philips EM430 operating at 300 keV. A bright field (BF) TEM image of the trenches is shown as FIG. 1 (a). A BF image from the top of the wafer is shown in FIG. 1(b). A BF image from the side-wall of the middle trench is shown in FIG. 1(c). Note that the side-wall damage clearly consists of two regions with different contrast. This layer clearly indicates that the side-wall damage consists of two regions: (i) an amorphization layer and (ii) a redeposition layer. X-ray energy dispersive spectrometry (XEDS) results showed that significa...