Characterization of the complete chloroplast genome of <i>Clematis potaninii</i> (Ranunculaceae), a medicinal and ornamental plant

Wang, Qi; Yang, Sha; Huang, Zhuangzhuang; Wang, Ping; Liao, Yufei; Zhao, Xueyan

doi:10.1080/23802359.2022.2097023

Mitochondrial DNA Part B

2022

DOI: 10.1080/23802359.2022.2097023

|View full text |Cite

Characterization of the complete chloroplast genome of Clematis potaninii (Ranunculaceae), a medicinal and ornamental plant

Qi Wang

Sha Yang

Zhuangzhuang Huang

et al.

Abstract: Clematis potaninii Maxim. is an important medicinal and ornamental plant. The length of C. potaninii chloroplast genome was 159,691 bp, with a large single-copy region of 79,503 bp, a small single-copy region of 18,106 bp, and two inverted repeat regions of 31,041 bp each. The chloroplast genome contains 138 genes including 94 protein-coding, eight rRNA, and 36 tRNA genes. Phylogenetic analysis showed that C. potaninii is closely related to C… Show more

Help me understand this report

Search citation statements

Order By: Relevance

Paper Sections

Select...

Citation Types

Supporting

Mentioning

Contrasting

Year Published

2024

Publication Types

Select...

Article2

Relationship

Self Cite0

Independent2

Authors

Journals

Cited by 2 publications

References 3 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

Phylogenomic analysis and dynamic evolution of chloroplast genomes of Clematis nannophylla

Qin,

Ma,

Liu

et al. 2024

Sci Rep

View full text Add to dashboard Cite

Clematis nannophylla is a perennial shrub of Clematis with ecological, ornamental, and medicinal value, distributed in the arid and semi-arid areas of northwest China. This study successfully determined the chloroplast (cp) genome of C. nannophylla, reconstructing a phylogenetic tree of Clematis. This cp genome is 159,801 bp in length and has a typical tetrad structure, including a large single-copy, a small single-copy, and a pair of reverse repeats (IRa and IRb). It contains 133 unique genes, including 89 protein-coding, 36 tRNA, and 8 rRNA genes. Additionally, 66 simple repeat sequences, 50 dispersed repeats, and 24 tandem repeats were found; many of the dispersed and tandem repeats were between 20–30 bp and 10–20 bp, respectively, and the abundant repeats were located in the large single copy region. The cp genome was relatively conserved, especially in the IR region, where no inversion or rearrangement was observed, further revealing that the coding regions were more conserved than the noncoding regions. Phylogenetic analysis showed that C. nannophylla is more closely related to C. fruticosa and C. songorica. Our analysis provides reference data for molecular marker development, phylogenetic analysis, population studies, and cp genome processes to better utilise C. nannophylla.

show abstract

Phylogenomic analysis and dynamic evolution of chloroplast genomes of Clematis nannophylla

Qin,

Ma,

Liu

et al. 2024

Sci Rep

View full text Add to dashboard Cite

show abstract

The complete chloroplast genome of Clematis serratifolia (Ranunculaceae) from Jilin province, China

Cui,

Yang,

Wang

et al. 2024

Mitochondrial DNA Part B

View full text Add to dashboard Cite

Clematis serratifolia has high medicinal and ornamental value. In this study, we characterize and report, for the first time, the complete chloroplast genome sequence of C. serratifolia based on high-throughput sequence dates. The whole chloroplast genome of C. serratifolia is a circular molecule of 159,648 bp in length, consisting of a large single-copy (LSC) region of 79,394 bp, a small single-copy (SSC) region of 18,112 bp, and two inverted repeat (IR) regions of 31,071 bp. The overall GC content of the chloroplast genome is 38%, while that in the LSC, SSC, and IR regions is 36.3%, 31.3%, and 42.1%, respectively. The chloroplast genome of C. serratifolia contains 133 genes, including 89 coding genes, 8 ribosomal RNAs, and 36 transfer RNAs. Among them, 14 protein-coding genes have a single intron, and 2 genes have two introns. The phylogenetic analysis showed a close relationship between C. serratifolia and C. heracleifolia .

show abstract

scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.

Contact Info

customersupport@researchsolutions.com

10624 S. Eastern Ave., Ste. A-614

Henderson, NV 89052, USA

This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.

Blog Terms and Conditions API Terms Privacy Policy Contact Cookie Preferences Do Not Sell or Share My Personal Information

Made with 💙 for researchers

Part of the Research Solutions Family.

Characterization of the complete chloroplast genome of Clematis potaninii (Ranunculaceae), a medicinal and ornamental plant

Cited by 2 publications

References 3 publications

Phylogenomic analysis and dynamic evolution of chloroplast genomes of Clematis nannophylla

Phylogenomic analysis and dynamic evolution of chloroplast genomes of Clematis nannophylla

The complete chloroplast genome of Clematis serratifolia (Ranunculaceae) from Jilin province, China

Contact Info

Product

Resources

About