This review reports the progress on the recent development of membranes in microfluidics. First of all, the definition and basic concepts of membranes are given. Second, the manufacturing methods of membranes in microfluidics are illustrated and discussed. And lastly, the applications of membranes in microfluidics that are the focus of this work are discussed including cells, proteins, microreactors, gas detection, drug screening, electrokinetical fluids, pump and valve and fluid transport control, chemical reagents detection and so on. A variety of microfluidic devices designed containing membranes are expounded and analyzed. This paper will provide a valuable reference to designers who research membranes and microfluidics for various applications. © 2016 Society of Chemical Industry