Interactions
between glycan-binding proteins (GBPs) and glycosphingolipids
(GSLs) are involved in numerous physiological and pathophysiological
processes. Many model membrane systems are available for studying
GBP–GSL interactions, but a systematic investigation has not
been carried out on how the nature of the model membrane affects binding.
In this work, we use electrospray ionization mass spectrometry (ESI-MS),
both direct and competitive assays, to measure the binding of cholera
toxin B subunit homopentamer (CTB5) to GM1 ganglioside
in liposomes, bilayer islands [styrene maleic acid lipid particles
(SMALPs), nanodiscs (NDs), and picodiscs (PDs)], and micelles. We
find that direct ESI-MS analysis of CTB5 binding to GM1
is unreliable due to non-uniform response factors, incomplete extraction
of bound GM1 in the gas phase, and nonspecific CTB5–GM1
interactions. Conversely, indirect proxy ligand ESI-MS measurements
show that the intrinsic (per binding site) association constants of
CTB5 for PDs, NDs, and SMALPs are similar and comparable
to the affinity of soluble GM1 pentasaccharide (GM1os).
The observed affinity decreases with increasing GM1 content due to
molecular crowding stemming from GM1 clustering. Unlike the smaller
model membranes, the observed affinity of CTB5 toward GM1
liposomes is ∼10-fold weaker than GM1os and relatively
insensitive to the GM1 content. GM1 glycomicelles exhibit the lowest
affinity, ∼35-fold weaker than GM1os. Together,
the results highlight experimental design considerations for quantitative
GBP–GSL binding studies involving multisubunit GBPs and factors
to consider when comparing results obtained with different membrane
systems. Notably, they suggest that bilayer islands with a low percentage
of GSL, wherein clustering is minimized, are ideal for assessing intrinsic
strength of GBP–GSL interactions in a membrane environment,
while binding to liposomes, which is sub-optimal due to extensive
clustering, may be more representative of authentic cellular environments.