Merkel cell carcinoma (MCC) is an aggressive neuroendocrine tumor of the skin currently with no cure. In this study, we have first demonstrated that c-Myc overexpression is common in MCC. By targeting c-Myc, bromodomain inhibitors have demonstrated antitumor efficacy in several preclinical human cancer models. Thus we interrogated the role of c-Myc inhibition in MCC with c-Myc amplification by employing the BET inhibitor JQ1. We have uncovered that c-Myc can be regulated by JQ1 in MCC cells with pathological c-Myc activation. Moreover, JQ1 potently abrogates c-Myc expression in MCC cells and causes marked G1 cell cycle arrest. Mechanistically, JQ1 induced cell cycle arrest coincides with downrgulation of cyclin D1 and upregulation of p21, p27 and p57, whereas JQ1 exerts no effect on apoptosis in MCC cells. Further knockdown of p21, p27 or p57 by shRNA partially protects cells from JQ1 induced cell cycle arrest. Additionally, c-Myc knockdown by shRNA generates significant cell cycle arrest, suggesting that c-Myc overexpression plays a role in MCC pathogenesis. Most importantly, JQ1 significantly attenuates tumor growth in xenograft MCC mouse models. Our results provide initial evidence indicating the potential clinical utility of BET protein inhibitors in the treatment of MCC with pathologic activation of c-Myc.