Clathrin Mediates Endocytosis and Polar Distribution of PIN Auxin Transporters in Arabidopsis

Ammonium is a preferred source of nitrogen for plants but is toxic at high levels. Plant ammonium transporters (AMTs) play an essential role in NH 4 + uptake, but the mechanism by which AMTs are regulated remains unclear. To study how AMTs are regulated in the presence of ammonium, we used variable-angle total internal reflection fluorescence microscopy and fluorescence crosscorrelation spectroscopy for single-particle fluorescence imaging of EGFP-tagged AMT1;3 on the plasma membrane of Arabidopsis root cells at various ammonium levels. We demonstrated that AMT1;3-EGFP dynamically appeared and disappeared on the plasma membrane as moving fluorescent spots in low oligomeric states under N-deprived and N-sufficient conditions. Under external high-ammonium stress, however, AMT1;3-EGFPs were found to amass into clusters, which were then internalized into the cytoplasm. A similar phenomenon also occurred in the glutamine synthetase mutant gln1;2 background. Single-particle analysis of AMT1;3-EGFPs in the clathrin heavy chain 2 mutant (chc2 mutant) and Flotllin1 artificial microRNA (Flot1 amiRNA) backgrounds, together with chemical inhibitor treatments, demonstrated that the endocytosis of AMT1;3 clusters induced by high-ammonium stress could occur mainly through clathrin-mediated endocytic pathways, but the contribution of microdomain-associated endocytic pathway cannot be excluded in the internalization. Our results revealed that the clustering and endocytosis of AMT1;3 provides an effective mechanism by which plant cells can avoid accumulation of toxic levels of ammonium by eliminating active AMT1;3 from the plasma membrane. VA-TIRFM | FCSA mmonium (NH 4 + ) and nitrate (NO 3 − ) are the primary sources of nitrogen (N) for most plants growing in agricultural soils. Ammonium assimilation requires less energy than nitrate assimilation, and, thus, ammonium is absorbed preferentially when plants are N-deficient. However, high concentrations of ammonium can be toxic (1); therefore, ammonia absorption and metabolism must be strictly controlled. Understanding the mechanisms by which plant cells regulate ammonium uptake and translocation is of critical importance for agricultural improvements in N-use efficiency and avoiding ammonium toxicity.Evidence suggests that membrane ammonium transporters (AMTs) act in NH 4 + uptake into plant cells, serving as the major transporters for high-affinity ammonium uptake (2). In Arabidopsis thaliana, the AMT family comprises six isoforms, of which three (AtAMT1;1, AtAMT1;2, and AtAMT1;3) are responsible for about 90% of the total high-affinity N uptake in roots (3). AMT gene expression in Arabidopsis roots is generally repressed by high N and induced by N deficiency (4). In addition to transcriptional mechanisms, regulation of membrane transporter activity is also involved in the plant's responses to changing nutrient supplies (1). Although posttranscriptional regulation of AMT appears to be N-dependent (5), the question of how ammonium regulates AMT transporter activity, particularly t...

Section: Resultsmentioning

confidence: 99%

Single-particle analysis reveals shutoff control of the Arabidopsis ammonium transporter AMT1;3 by clustering and internalization

Wang

Zhao

Luo

et al. 2013

“…The polar localization of PIN proteins at the apico-basal domain of root cells requires clearance from the PM by endocytosis involving clathrin (37,38), retargeting to and retention at the polar domain (39,40). Similarly, possible tyrosine-based motifs have been involved in the lateral polarity of BOR1, suggesting a role for endocytosis that depends on clathrin in this process (27).…”

Section: Resultsmentioning

confidence: 99%

Polarization of IRON-REGULATED TRANSPORTER 1 (IRT1) to the plant-soil interface plays crucial role in metal homeostasis

Barberon

Dubeaux

Kolb

et al. 2014

231

246

In plants, the controlled absorption of soil nutrients by root epidermal cells is critical for growth and development. IRON-REGULATED TRANSPORTER 1 (IRT1) is the main root transporter taking up iron from the soil and is also the main entry route in plants for potentially toxic metals such as manganese, zinc, cobalt, and cadmium. Previous work demonstrated that the IRT1 protein localizes to early endosomes/trans-Golgi network (EE/TGN) and is constitutively endocytosed through a monoubiquitin-and clathrindependent mechanism. Here, we show that the availability of secondary non-iron metal substrates of IRT1 (Zn, Mn, and Co) controls the localization of IRT1 between the outer polar domain of the plasma membrane and EE/TGN in root epidermal cells. We also identify FYVE1, a phosphatidylinositol-3-phosphate-binding protein recruited to late endosomes, as an important regulator of IRT1-dependent metal transport and metal homeostasis in plants. FYVE1 controls IRT1 recycling to the plasma membrane and impacts the polar delivery of this transporter to the outer plasma membrane domain. This work establishes a functional link between the dynamics and the lateral polarity of IRT1 and the transport of its substrates, and identifies a molecular mechanism driving polar localization of a cell surface protein in plants.Arabidopsis | endocytosis | nutrition | radial transport | PI3P

“…Both clathrindependent and -independent internalization mechanisms have been described in plants (23,24). Because clathrin has been shown to function in BRI1 endocytosis (9), we addressed genetically whether clathrin is required for the internalization of PRRs.…”

Section: Resultsmentioning

confidence: 99%

“…In Arabidopsis, two related genes, CHC1 and CHC2, encode clathrin heavy chains, of which chc2 mutants were shown to affect endocytic events from the plasma membrane (23). To investigate whether FLS2 endocytosis is mediated by CHC2 in Arabidopsis, we treated cotyledons of chc2-1 mutants with TAMRA-flg22.…”

Section: Resultsmentioning

confidence: 99%

Clathrin-dependent endocytosis is required for immunity mediated by pattern recognition receptor kinases

Mbengue

Bourdais

Gervasi

et al. 2016

181

213

Sensing of potential pathogenic bacteria is of critical importance for immunity. In plants, this involves plasma membrane-resident pattern recognition receptors, one of which is the FLAGELLIN SENSING 2 (FLS2) receptor kinase. Ligand-activated FLS2 receptors are internalized into endosomes. However, the extent to which these spatiotemporal dynamics are generally present among pattern recognition receptors (PRRs) and their regulation remain elusive. Using live-cell imaging, we show that at least three other receptor kinases associated with plant immunity, PEP RECEPTOR 1/2 (PEPR1/2) and EF-TU RECEPTOR (EFR), internalize in a ligand-specific manner. In all cases, endocytosis requires the coreceptor BRI1-ASSOCIATED KINASE 1 (BAK1), and thus depends on receptor activation status. We also show the internalization of liganded FLS2, suggesting the transport of signaling competent receptors. Trafficking of activated PRRs requires clathrin and converges onto the same endosomal vesicles that are also shared with the hormone receptor BRASSINOSTERIOD INSENSITIVE 1 (BRI1). Importantly, clathrin-dependent endocytosis participates in plant defense against bacterial infection involving FLS2-mediated stomatal closure and callose deposition, but is uncoupled from activation of the flagellin-induced oxidative burst and MAP kinase signaling. In conclusion, immunity mediated by pattern recognition receptors depends on clathrin, a critical component for the endocytosis of signaling competent receptors into a common endosomal pathway.pattern-triggered immunity | clathrin | FLS2 | PEPR1 | EFR