Herein we reported the design and synthesis of two series comprising twenty-two benzenesulfonamides that integrate the
s
-triazine moiety. Target compounds successfully suppressed the hCA IX, with IC
50
ranging from 28.6 to 871 nM. Compounds
5d
,
11b
,
5b
, and
7b
were the most active analogues, which inhibited hCA IX isoform in the low nanomolar range (
K
I
= 28.6, 31.9, 33.4, and 36.6 nM, respectively). Furthermore, they were assessed for their cytotoxic activity against a panel of 60 cancer cell lines following US-NCI protocol. According to five-dose assay,
13c
showed significant anticancer activity than
5c
with GI
50
-MID values of 25.08 and 189.01 µM, respectively. Additionally,
13c
’s effects on wound healing, cell cycle disruption, and apoptosis induction in NCI-H460 cancer cells were examined. Further, docking studies combined with molecular dynamic simulation showed a stable complex with high binding affinity of
5d
to hCA IX, exploiting a favourable H-bond and lipophilic interactions.
HIGHLIGHTS
Carbonic anhydrase (CA) inhibitors comprising rigid and flexible linkers were developed.
Compound
5d
is the most potent CA IX inhibitor in the study (IC50: 28.6 nM).
Compounds
5c
and
13c
displayed the greatest antiproliferative activity towards 60 cell lines.
Compound
13c
exposed constructive outcomes on normal cell lines, metastasis, and wound healing.
Molecular docking and molecular dynamics (MDs) simulation was utilised to study binding mode.