Mycobacterium leprae DNA gyrases carrying various mutations, previously described in clinical strains, were investigated for quinolone susceptibility by inhibition of supercoiling and DNA cleavage promotion. We demonstrated that the gyrA mutations leading to G89C or A91V confer fluoroquinolone resistance whereas the gyrB mutation leading to D205N does not.Mycobacterium leprae still causes serious chronic disease, and treatment may fail because of poor drug adherence and emergence of resistance (4,10,11,13,18,19). Fluoroquinolones are new drugs for the treatment of leprosy (6,(8)(9)(10)16), but their use can lead to acquired quinolone resistance in M. leprae (4,11,13). DNA gyrase, a heterotetramer (GyrA 2 GyrB 2 ) enzyme solving DNA topological problems associated with DNA replication, transcription, and recombination (5), is the sole target of quinolones in M. leprae (7).M. leprae has the longest doubling time (ϳ14 days) among bacteria and cannot be cultivated in vitro (12). Consequently, the only way to test antibiotic activity is the mouse footpad leprosy model, which is labor intensive and expensive and requires 8-to 12-month experiments (12). Therefore, our aim was to evaluate the consequences of the DNA gyrase mutations described in M. leprae clinical strains (4, 11, 13) on the quinolone inhibition of DNA gyrase as a prerequisite for the development of rapid genetic susceptibility tests. We demonstrated that the GyrA G89C and A91V alterations are implicated in resistance to quinolones whereas the GyrB D205N alteration is not.Plasmids carrying M. leprae genes gyrA and gyrB containing the mutations corresponding to the GyrA G89C or A91V (4, 13) and GyrB D205N (11) alterations were generated from the respective wild-type gyrA and gyrB genes of M. leprae cloned previously (14), with the QuikChange site-directed mutagenesis kit (Stratagene). For the oligonucleotides used for mutagenesis, see Table S1 in the supplemental material. Wildtype and modified GyrA and GyrB proteins were purified as described previously (14). DNA supercoiling and DNA cleavage experiments were carried out as described previously (1,2,14). Nalidixic acid, oxolinic acid, ofloxacin, moxifloxacin, gatifloxacin, and garenoxacin were from Sigma or from the respective laboratories.The 50% inhibitory concentrations (IC 50 s) of gatifloxacin, moxifloxacin, and ofloxacin for the enzymes modified in GyrA were 3-to 11-fold higher (GyrA G89C) and 5-to 8-fold higher (GyrA A91V) than for the wild-type enzyme ( Fig. 1; Table 1). The concentrations of fluoroquinolones and garenoxacin required for the conversion of 25% of the DNA to the linear form (CC 25 s) were 12-to 17-fold higher for the DNA gyrase GyrA A91V than those measured for the wild-type enzyme ( Fig. 2; Table 1). As observed previously for the wild-type Mycobacterium tuberculosis and M. leprae DNA gyrases (1, 14), the two classical nonfluorinated quinolones nalidixic acid and oxolinic acid did not lead to the formation of a DNA cleavable complex with the DNA gyrase GyrA A91V (Table 1). DNA cle...