Southern hybridization analysis ofBacillus subtilis 168S chromosomal DNA with a Bacilus licheniformis cell wall hydrolase gene, cwlM, as a probe indicated the presence of a cwlMf homolog in B. subtils. DNA sequencing of the cwLM homologous region showed that a gene encoding a polypeptide of 255 amino acids with a molecular mass of 27,146 Da is located 625 bp upstream and in the opposite direction of spoVJ. The deduced amino acid sequence of this gene (tentatively designated as cwlC) showed an overall identity of 73% with that of cwlM and of 40% with the C-terminal half of the B. subtiUis vegetative autolysin, CwIB. The construction of an in-frame cwlC-lacZ fusion gene in the B. subtils chromosome indicated that cwlC is induced at 6 to 7 h after sporulation (t6 to t7). The spoIHIC (d~") mutation and earlier sporulation mutations greatly reduced the expression of the cwlC-lacZ fusion gene. Northern hybridization analysis using oligonucleotide probes of the cwlC region indicated that a unique cwlC transcript appeared at t7*. and t9. Transcriptional start points determined by primer extension analysis suggested that the -10 region is very similar to the consensus sequence for the oK-dependent promoter. Insertional inactivation of the cwlC gene in the B. subtUis chromosome caused the disappearance of a 31-kDa protein lytic for Micrococcus cell walls, which is mainly located within the cytoplasmic and membrane fractions of cells at t9. The CwIC protein hydrolyzed both B. subtilis vegetative cell walls and spore peptidoglycan.From Bacillus subtilis, two vegetative autolysins, a 50-kDa N-acetylmuramoyl-L-alanine amidase (amidase) and a 90-kDa endo-3-N-acetylglucosaminidase (glucosaminidase), have been purified and characterized (16,38). The former occurs in large amounts (16,24), and the gene, cwlB, has recently been cloned and studied at the molecular level (24,29). The cwlB operon consists of three genes encoding a putative lipoprotein (LppX), a modifier protein (CwbA) that stimulates amidase activities, and CwlB, in that order (22,24,26,29). The transcription of the cwlB operon mainly depends on expression of the eD protein, which is responsible for cell motility and chemotaxis (26,32). Other cell wall hydrolases of B. subtilis have been described previously by us (23) and Foster (11,12). A 30-kDa amidase gene, cwl4, has been cloned, but its expression is very low under normal growth conditions (11,23). Foster demonstrated novel cell wall lytic activities of A3 (34-kDa) and A4 (30-kDa), which increases during sporulation, and also sporulation-specific activities of A5 (23-kDa) and A6 (41-kDa) by means of renaturing gel electrophoresis in substrate-containing gels (12). The physiological roles of these multiple autolysins, i.e., cell wall turnover (2, 5), cell separation (5, 10, 37), flagellation (10), and competence (3), have been suggested by many investigators, but there was little evidence because they used regulatory mutants [flaD (sin, lyt) and sacU (Hy)] with reduced autolysin levels (26). Asymmetric septum pep...