Serine proteinase inhibitors or serpins are a superfamily of homologous proteins that are for the most part involved in the regulation of proteolytic processes in a variety of biological systems. Utilizing a polymerase chain reaction-based strategy we have cloned a novel member of the ovalbumin family of serpins from a human bone marrow cDNA library. The new gene encodes a 397-amino acid protein, designated bomapin, with a calculated molecular mass of 45 kDa and 48% amino acid identity with plasminogen activator inhibitor-2, human leukocyte elastase inhibitor, and cytoplasmic antiproteinase. A single 2.3-kilobase bomapin transcript is highly expressed in human bone marrow cells but was undetectable in all other analyzed human tissues. In vitro transcription and translation of the bomapin cDNA revealed the synthesis of an appropriately sized protein that was able to form SDS-stable complexes with thrombin and trypsin. The restricted expression of bomapin to the bone marrow raises the possibility that this serpin may play a role in the regulation of protease activities during hematopoiesis.Serine proteinase inhibitors or serpins are a ubiquitous superfamily of homologous proteins that resemble ␣ 1 -proteinase inhibitor (␣ 1 -PI) 1 in overall structure (1). In general, serpins contain a highly exposed reactive site loop near the C terminus of the molecule that interacts as a pseudosubstrate for the target protease. The inhibitory specificity of the serpin is mainly defined by the P 1 -P 1 Ј amino acid residues in the reactive site loop. Interaction of these amino acids with the active site of the target protease triggers a dramatic conformational change in the serpin that results in a stoichiometric 1:1 inhibitory complex with the protease, which is typically stable to treatment with denaturants such as SDS (2). In addition to the serpins that regulate protease activity, several members of this superfamily lack a protease inhibitory capability, e.g. angiotensinogen and ovalbumin (1, 3). Ovalbumin represents the parent prototype of a unique family of proteins within the serpin superfamily, which have several structural features in common, including the absence of a typical cleavable signal sequence (4). Previously identified members of this ovalbumin family of serpin proteins (ov-serpins) include plasminogen activator inhibitor-2 (PAI-2) (5), human leukocyte elastase inhibitor (6), and squamous cell carcinoma antigen (7). More recently, a tumor suppressor called maspin (8), which is presumably not a protease inhibitor (9, 10), and cytoplasmic antiproteinase or CAP (11), also known as placental thrombin inhibitor (12) or as protease inhibitor 6 (13), have been identified as ov-serpins.Although cytoplasmic proteases play a key role in a variety of cellular functions (14, 15), little is known about the physiological targets of the ov-serpins that are expressed predominantly or exclusively as intracellular proteins (i.e. PAI-2, human leukocyte elastase inhibitor, and CAP). Kumar and Baglioni (16) have shown that overe...