Within the trimeric HIV-1 envelope (Env) spike, the first and second variable loops (V1V2 region) and the third variable loop (V3) of the gp120 subunit play dual roles in antibody recognition, because they contain neutralization epitopes and also participate in epitope masking. The spatial relationships between V1V2 and V3 and the associated mechanisms of epitope masking remain unclear. Here we investigated interactions between these domains using two monoclonal antibodies recognizing distinct conserved linear epitopes that are subject to masking in the functional trimer, which limits their neutralizing activities. Using Env pseudotype virus infection assays, we found that deleting the V1V2 region greatly enhanced neutralization by both antibodies, leading us to consider two alternative models: V1V2 on one gp120 protomer masks V3 on the same protomer (intraprotomer or cis masking) versus on an adjacent protomer (interprotomer or trans masking). Our experimental approach exploited a previously described complementation system wherein two variant Envs harboring different inactivating mutations (one in gp120, the other in gp41) are coexpressed in the same cell; functional Env results only from cooperative interactions within mixed trimers, thereby enabling selective examination of mixed trimer activity. We introduced additional mutations that either promoted (V1V2 deletion, i.e., unmasking) or prevented (GPGR to GPGQ mutation, i.e., epitope destruction) interaction with the antibodies. The observed neutralization sensitivities of mixed trimers produced from various combinations of constructs support the intraprotomer (cis) model of V1V2 masking of V3 epitopes.envelope glycoprotein trimer | functional complementation | Env trimer structure | cis versus trans T he envelope glycoprotein (Env) of HIV-1 and the related simian immunodeficiency virus (SIV) is the molecular machine that drives virion entry into the target cell (1). The Env spikes displayed on the surface of virions and infected cells are homotrimers of gp120/gp41 heterodimers, derived by proteolytic maturation of the gp160 precursor. Upon initiation of HIV-1 infection, gp120 binds first to the "primary" cellular receptor CD4, then to the "coreceptor," i.e., chemokine receptor CCR5 or CXCR4. These sequential events are associated with dramatic conformational changes in both the gp120 and gp41 subunits, leading to insertion of the N-terminal fusion peptide of gp41 into the membrane of the target cell, followed by gp41 refolding and direct fusion of the virion and plasma membranes. The end result is virion entry. Because of its role in the initial step of HIV infection and its prominent display on the virion surface, the Env spike is the primary target of neutralizing antibodies during natural infection and for vaccine development (2). Moreover, the preferential reactivity of an Env for CCR5 and/or CXCR4 dictates the tropism of HIV-1 variants for different CD4-expressing target cell types, a critical determinant of HIV transmission and pathogenesis (3). Entry...