Complete chloroplast genome of Chloranthus henryi (chloranthaceae)

Abstract

The complete chloroplast genome of Chloranthus henryi, an important traditional Chinese herbal medicine, was sequenced and characterized in this study. The genome size is 157,990 bp in length with 37.3% GC content. Two inverted repeats of 26,151 bp are separated by a large single-copy region (87,148 bp), and a small single-copy region (18,569 bp). A total of 131 genes were identified, including 86 protein-coding genes, 37 tRNA genes and 8 rRNA genes. Eight plastome accessions from Chloranthales, Austrobaileyales, Nymphaeales, and Amborellales were selected to assess the phylogenetic placement of genus.

Transcriptome Characterization and Identification of Molecular Markers (SNP, SSR, and Indels) in the Medicinal Plant Sarcandra glabra spp.

“…Among the annotated pathways, the carbohydrate metabolism was observed to be on top hit. The evaluation of functional ortholog of this pathway indicated 187 unigenes for the glutathione S-transferase (GST) functional ortholog (k00799 in Map-05200) known as important genes in medicinal plants [ 22 ]. The glutathione S-transferases belong to a supergene family of seven cytosolic enzymes that catalyze the conjugation of glutathione (GSH) to a variety of electrophiles including arene oxides, unsaturated carbonyls, organic halides, and other substrates [ 35 ].…”

“…Recently, different reports based on genomics [17], transcriptomics [18], metabolomics [18], and phenomics [19] have been reported in S. glabra. Various researches for characterization of extrachromosomal (chloroplast) genome [20][21][22] and to find the evolutionary relationship of various S. glabra subspecies [23] have also been presented. Furthermore, the amplified fragmentlength polymorphism (AFLP) and microsatellite establishment [24,25] and SNP marker manipulation studies [26] have also been carried out for molecular evaluation in S. glabra.…”

Chemistry and bioactivity of lindenane sesquiterpenoids and their oligomers

“…Based on the characteristic locations of OH or OOH and double bond in these compounds, a plausible epoxidation or [2 + 2] addition between O 2 and D 4 (5) and subsequent H + -mediated cracking and double bond migration can yield derivates with OH-4 and D 5 (6) (188,189,193,195,196,(201)(202)(203)(204)208, and 209), OOH-4 and D 5 (6) (190-192, 194, 197-200, and 205-207), OH-5 and D 15(4) (151), or OOH-5 and D 15(4) (210-213) (Fig. 6).…”

“…198 In the same year, a high-quality chromosome-level genome of C. spicatus was assembled and the genes of the sesquiterpenes synthases were predicted. 199 Additionally, the complete chloroplast genome of S. glabra , 200,201 C. henryi , 202 C. spicatus , 203 and L. aggregate 204 and the complete plastid genome sequence of C. fortunei were reported. 205 The establishment of a biosynthesis platform is the basis for biosynthesis research on plant natural products.…”

The complete plastid genome sequence of Chloranthus fortunei (A. Gray) Solms-Laub. in Chloranthaceae

“… 2007 ), Chloranthus henryi MK922064 (Liu et al. 2019 ), Sarcandra glabra MH939147 (Wang et al. 2020 ), Schisandra sphenanthera MK193856 (Wei et al.…”