Complete genome sequence of a novel virus isolated from the phytopathogenic fungus Ceratobasidium sp. AG-A strain SHX-YJLC-1

Zhang, Xinyi; Shi, Hao; Li, Jinting; Wu, Xuehong

doi:10.1007/s00705-023-05868-6

Cited by 2 publications

References 27 publications

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Complete genome sequence of a novel gammapartitivirus from Penicillium oxalicum RCEF7482

Sun,

Wang,

et al. 2024

Arch Virol

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Penicillium oxalicum, an essential biocontrol fungus in China, has been a subject of extensive study due to its role in combating various pathogenic fungi. Despite the prevalence of mycoviruses with doublestranded (ds) RNA genomes in lamentous fungi, no instances of mycovirus infection have been reported in P. oxalicum. In this investigation, we present the identi cation and characterization of a novel dsRNA virus isolated from P. oxalicum, designated as "Penicillium oxalicum partitivirus 1" (PoPV1). The genome of PoPV1 consists of two dsRNA segments , dsRNA1 (1,770 bp) and dsRNA2 (1,584 bp), each hosting a single open reading frame (ORF): ORF1 and ORF2. Comparative analysis revealed that PoPV1's RdRp and CP sequences share the highest identity (89.18% and 73.97%, respectively) with Penicillium aurantiogriseum partitivirus 1 (PaPV1). Motif analysis based on RdRp amino acid sequences places PoPV1 in the genus Gammapartitivirus within the familyPartitiviridae, with a distinctive motif VI (R/KV/ILGDD). Phylogenetic analysis further establishes PoPV1's close relationship with PaPV1, forming a unique clade within gammapartitiviruses. Consequently, we propose that Penicillium oxalicum partitivirus 1 represents a novel species in the genus Gammapartitivirus, marking the rst reported case of dsRNA in P. oxalicum. Full Text Mycoviruses, also known as fungal viruses, are widely distributed among various fungi, showcasing diverse genome types, including double-stranded (ds) RNA, positive-sense (+) single-stranded (ss) RNA, negative-sense (−) ssRNA, or ssDNA. The International Committee on Taxonomy of Viruses (ICTV) has meticulously classi ed mycoviruses into 30 taxa and two unclassi ed genera [1], highlighting their genomic diversity and signi cance in the fungal kingdom.

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Complete genome sequence of a novel gammapartitivirus from Penicillium oxalicum RCEF7482

Sun,

Wang,

et al. 2024

Arch Virol

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A novel gammapartitivirus from the Penicillium oxalicum RCEF7482

Huang,

Sun,

Wang

et al. 2023

Preprint

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Penicillium oxalicum, an essential biocontrol fungus in China, has been a subject of extensive study due to its role in combating various pathogenic fungi. Despite the prevalence of mycoviruses with double-stranded (ds) RNA genomes in filamentous fungi, no instances of mycovirus infection have been reported in P. oxalicum. In this investigation, we present the identification and characterization of a novel dsRNA virus isolated from P. oxalicum, designated as "Penicillium oxalicum partitivirus 1" (PoPV1). The genome of PoPV1 consists of two dsRNA segments, dsRNA1 (1,770 bp) and dsRNA2 (1,584 bp), each hosting a single open reading frame (ORF): ORF1 and ORF2. Comparative analysis revealed that PoPV1's RdRp and CP sequences share the highest identity (89.18% and 73.97%, respectively) with Penicillium aurantiogriseum partitivirus 1 (PaPV1). Motif analysis based on RdRp amino acid sequences places PoPV1 in the genus Gammapartitivirus within the familyPartitiviridae, with a distinctive motif VI (R/KV/ILGDD). Phylogenetic analysis further establishes PoPV1's close relationship with PaPV1, forming a unique clade within gammapartitiviruses. Consequently, we propose that Penicillium oxalicum partitivirus 1 represents a novel species in the genus Gammapartitivirus, marking the first reported case of dsRNA in P. oxalicum.

show abstract

Complete genome sequence of a novel virus isolated from the phytopathogenic fungus Ceratobasidium sp. AG-A strain SHX-YJLC-1

Cited by 2 publications

References 27 publications

Complete genome sequence of a novel gammapartitivirus from Penicillium oxalicum RCEF7482

Complete genome sequence of a novel gammapartitivirus from Penicillium oxalicum RCEF7482

A novel gammapartitivirus from the Penicillium oxalicum RCEF7482

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