Complete Genome Sequence of Foot-and-Mouth Disease Virus Type A Circulating in Bangladesh

Ullah, Huzzat; Siddique, Mohammad Anwar; Sultana, Munawar; Hossain, M. Anwar

doi:10.1128/genomea.00506-14

Cited by 14 publications

(20 citation statements)

References 4 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…In Bangladesh, FMD occurs as endemic disease, and the frequency was progressively increasing all over the country since 2009 (Nandi et al 2013). FMDV serotype O was the only serotype that was reported to be circulating in Bangladesh in the late 2009 (Loth et al 2011) and after that both serotypes O and A were reported by our laboratory in late 2012 (Nandi et al 2013;Sultana et al 2014;Ullah et al 2014). However, the trend of FMDV serotype distribution in Bangladesh indicates that O, A and Asia1 were equally reported between 1958 and 1996, but in later studies, serotype Asia1 was not reported; rather, serotypes O and A were circulating (Loth et al 2011;Nandi et al 2013).…”

Section: Introductionmentioning

confidence: 64%

See 1 more Smart Citation

Re‐emergence of circulatory foot‐and‐mouth disease virus serotypes Asia1 in Bangladesh and VP1 protein heterogeneity with vaccine strain IND 63/72

Ullah

Siddique

Amin

et al. 2014

Lett Appl Microbiol

View full text Add to dashboard Cite

Foot-and-mouth disease virus (FMDV) serotypes O, A and Asia1 are responsible for significant number of disease outbreaks in Bangladesh; however serotype Asia1 has not been reported in circulation since 1996. The present investigation reports the detection of serotype FMDV Asia1 from local farms in 2012 and 2013 outbreaks. The farms were located in Jessore and Gazipur districts, and one of these farms was under vaccine control programme. Phylogenetic analysis of the complete VP1 gene revealed that FMDV Asia1 is under genetic lineage C having close similarity to the Asia1 sequences of Indian origin. The circulatory genotype Asia1 showed VP1 protein sequence heterogeneity of eight amino acid substitutions within the G-H loop with the vaccine strain [IND 63/72 (AY304994)] used in vaccination programme. ELISA assay revealed that, of seven, only one local field serum sample (cattle vaccinated 38 days earlier) was positive at a titre level of >2.4 (log10) but failed to protect the cattle from infection occurred by the virus. This investigation focused that the eight amino acid substitution in VP1 protein at G-H loop of the locally circulated FMDV serotype Asia1 strain may be a reason for current vaccination failure.

show abstract

Section: Introductionmentioning

confidence: 64%

“…; Ullah et al . ). However, the trend of FMDV serotype distribution in Bangladesh indicates that O, A and Asia1 were equally reported between 1958 and 1996, but in later studies, serotype Asia1 was not reported; rather, serotypes O and A were circulating (Loth et al .…”

Section: Introductionmentioning

confidence: 97%

Re‐emergence of circulatory foot‐and‐mouth disease virus serotypes Asia1 in Bangladesh and VP1 protein heterogeneity with vaccine strain IND 63/72

Ullah

Siddique

Amin

et al. 2014

Lett Appl Microbiol

View full text Add to dashboard Cite

show abstract

“…Among those, 206 samples were detected positive for FMDV RNA that were further analysed by amplifying the VP1 coding region using specific primers (for serotypes O, A and Asia1) to determine the serotypes of the virus. Selected 70 representative VP1‐specific amplicons covering all of the outbreak areas were sequenced and submitted to the NCBI GenBank database (Table ), of which, 30 sequences (FMDV serotype O‐8, serotype A‐15, serotype Asia1‐7) were published earlier (Ali et al., ; Nandi et al., ; Siddique et al., ; Sultana et al., ; Ullah, Siddique, Sultana, & Hossain, ; Ullah et al., ). Among the 34 outbreaks covered in this study, serotype O was responsible for 28 (82%) outbreaks, whereas 4 (12%) and 2 (6%) outbreaks were caused by serotypes A and Asia1, respectively—indicating serotype O as the dominant serotype.…”

Section: Resultsmentioning

confidence: 99%

Emergence of two novel sublineages Ind2001BD1 and Ind2001BD2 of foot-and-mouth disease virus serotype O in Bangladesh

Siddique

Ali

Alam

et al. 2018

Transbound Emerg Dis

View full text Add to dashboard Cite

Foot-and-mouth disease (FMD) is endemic in Bangladesh, and the implementation of a control programme for this disease is at an early stage, according to the FAO- and OIE-proposed Progressive Control Pathway for FMD (PCP-FMD) Roadmap. To develop an effective control programme, understanding of foot-and-mouth disease virus (FMDV) serotypes, even subtypes within the serotypes is essential. The present investigation aims at viral VP1 coding region sequence-based analysis of FMD samples collected from 34 FMD outbreaks during 2012-2016 in Bangladesh. Foot-and-mouth disease virus (FMDV) serotype O was responsible for 82% of the outbreaks in Bangladesh, showing its dominance over serotype A and Asia1. The VP1 phylogeny revealed the emergence of two novel sublineages of serotype O, named as Ind2001BD1 and Ind2001BD2, within the Ind2001 lineage along with the circulation of Ind2001d sublineage in Bangladesh, which was further supported by the multidimensional scaling with distinct clusters for each sublineage. The novel sublineages had evident genetic variability with other established sublineages within Ind2001 lineage. Ten mutations with three or more amino acid variations were detected within B-C loop, G-H loop and C-terminal region of the VP1 protein of FMDV serotype O viruses isolated exclusively from Bangladesh. Furthermore, two amino acid substitutions at positions 197 and 198 within the VP1 C-terminal region are unique to the novel sublineages. The existence of widespread genetic variations among circulatory FMDV serotype O viruses makes the FMD control programme complex in Bangladesh. Adequate epidemiological data, disease reporting, animal movement control, appropriate vaccination and above all stringent policies of the government are necessary to combat FMD in Bangladesh.

show abstract

“…FMDV circulating in India since 2005 belongs to genotype II, further classified into lineages C (group VIII) and D (group III) (Subramaniam et al., ). Genotype II has also been characterized from outbreaks in Bangladesh (Ullah et al., , ). Antigenic characterization suggests that the current local vaccine protects appropriately from this serotype (Sanyal et al., ; Subramaniam et al., ; WRLFMD, ).…”

Section: Endemic Pools In Asiamentioning

confidence: 99%

Review of the Global Distribution of Foot-and-Mouth Disease Virus from 2007 to 2014

Brito

Rodrı́guez

Hammond

et al. 2015

Transbound Emerg Dis

223

212

View full text Add to dashboard Cite

Foot-and-mouth disease (FMD) virus affects livestock worldwide. There are seven different serotypes, each with a diversity of topotypes, genetic lineages and strains. Some lineages have different properties that may contribute to sporadic spread beyond their recognized endemic areas. The objective of this study was to review the most significant FMD epidemiological events that took place worldwide between 2007 and 2014. Severe epidemics were caused by FMD virus (FMDV) lineage O/Asia/Mya-98 in Japan and South Korea in 2010, both previously free of disease. In India, where FMD is endemic, the most important event was the re-emergence of lineage O/ME-SA/Ind-2001 in 2008. Notably, this lineage, normally restricted to India, Bangladesh, Nepal and Bhutan, was also found in Saudi Arabia and Libya in 2013 and has caused several outbreaks in Tunisia and Algeria in 2014-2015. In January 2011, FMDV-positive wild boars were found in Bulgaria, where the disease last occurred in 1996, followed by 12 outbreaks in livestock infected with FMDV O/ME-SA/PanAsia2. In 2012, FMDV SAT2 caused outbreaks in Egypt and the Palestinian Autonomous Territories. Another significant event was the emergence of FMDV Asia1 Sindh-08 in the Middle East. In South America, one outbreak of FMDV serotype O, topotype Euro-SA was reported in Paraguay in 2011, which was recognized as FMD-free with vaccination at the time. Lessons learned from past events, point out the need for an integrated strategy that comprises coordinated global and regional efforts for FMDV control and surveillance. Specific local characteristics related to host, environment and virus that condition FMD occurrence should be carefully considered and incorporated to adapt appropriate strategies into local plans. In this review, we compiled relevant epidemiological FMD events to provide a global overview of the current situation. We further discussed current challenges present in different FMD areas.

show abstract

Complete Genome Sequence of Foot-and-Mouth Disease Virus Type A Circulating in Bangladesh

Cited by 14 publications

References 4 publications

Re‐emergence of circulatory foot‐and‐mouth disease virus serotypes Asia1 in Bangladesh and VP1 protein heterogeneity with vaccine strain IND 63/72

Re‐emergence of circulatory foot‐and‐mouth disease virus serotypes Asia1 in Bangladesh and VP1 protein heterogeneity with vaccine strain IND 63/72

Emergence of two novel sublineages Ind2001BD1 and Ind2001BD2 of foot-and-mouth disease virus serotype O in Bangladesh

Review of the Global Distribution of Foot-and-Mouth Disease Virus from 2007 to 2014

Contact Info

Product

Resources

About