Complete mitogenome of the biocontroller fungus<i>Purpureocillium</i>sp. (Ascomycota, Ophiocordycipitaceae, Hypocreales)

Cardona, Nadya L; Franco‐Sierra, Nicolás D.; Álvarez, Javier Correa

doi:10.1080/23802359.2018.1522982

Cited by 6 publications

(8 citation statements)

References 4 publications

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“…Our results were supported by other studies which reported that fungicides decrease pathogen infections by stimulating the rhizosphere microbial community ( Zhou et al, 2020 ). The abundance levels of Proteobacteria, Actinobacteria, and Ascomycota were significantly high in T. controversa -infected plants that were coated with a fungicide when compared to the control plants ( Figure 4 ), and the above-mentioned findings were supported by the previous studies ( Newman et al, 2016 ; Cardona et al, 2018 ). Overall, we optimized the fungicide concentration to control dwarf bunt based on the signature of the microbial community.…”

Section: Discussionsupporting

confidence: 85%

Characterization of Rhizosphere Microbial Communities for Disease Incidence and Optimized Concentration of Difenoconazole Fungicide for Controlling of Wheat Dwarf Bunt

et al. 2022

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Rhizosphere soil microorganisms have great agricultural importance. To explore the relationship between rhizosphere microorganisms and the disease incidence, and to optimize the concentration of difenoconazole fungicide for the control of wheat dwarf bunt, caused by Tilletia controversa Kühn, the rhizosphere microorganisms were characterized based on sequencing methods. We found that the disease incidence correlated with the relative abundance of some microbial communities, such as Acidobacteria, Nocardioides, Roseiflexaceae, Pyrinomonadaceae, and Gemmatimonadaceae. Actinobacteria showed significant differences in the infected soils when compared to the control soils, and the relative abundance of Acidobacteria, Pyrinomonadaceae, Gemmatimonadaceae, and Saccharimonadales populations was distinctly higher in the T. controversa-inoculated group than in the control group. The members of Dehalococcoidia, Nitrosomonadaceae, and Thermomicrobiales were found only in T. controversa-inoculated soils, and these taxa may have potential effects against the pathogen and contribute to disease control of wheat dwarf bunt. In addition, for T. controversa-infected plants, the soil treated with difenoconazole showed a high relative abundance of Proteobacteria, Actinobacteria, Ascomycota, Basidiomycota, Mortierellomycota, and Olpidiomycota based on the heatmap analysis and ANOVA. Our findings suggest that the optimized concentration of fungicide (5% recommended difenoconazole) exhibits better control efficiency and constant diversity in the rhizosphere soil.

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Section: Discussionsupporting

confidence: 85%

Characterization of Rhizosphere Microbial Communities for Disease Incidence and Optimized Concentration of Difenoconazole Fungicide for Controlling of Wheat Dwarf Bunt

et al. 2022

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“…Our results were supported by other studies which reported that fungicides decrease pathogen infections by stimulating the rhizosphere microbial community . The abundance levels of Proteobacteria, Actinobacteria, and Ascomycota were significantly high in T. controversa-infected plants that were coated with a fungicide when compared to the control plants (Figure 4), and the above-mentioned findings were supported by the previous studies (Newman et al, 2016;Cardona et al, 2018). Overall, we optimized the fungicide concentration to control dwarf bunt based on the signature of the microbial community.…”

Section: Discussionsupporting

confidence: 79%

Community Series in Plants and Microbial Communities: Diversity, Pathogens and Biological Control, Volume II

Wang,

Uddin Mridha

2023

Frontiers Research Topics

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Frontiers is more than just an open access publisher of scholarly articles: it is a pioneering approach to the world of academia, radically improving the way scholarly research is managed. The grand vision of Frontiers is a world where all people have an equal opportunity to seek, share and generate knowledge. Frontiers provides immediate and permanent online open access to all its publications, but this alone is not enough to realize our grand goals. Frontiers journal seriesThe Frontiers journal series is a multi-tier and interdisciplinary set of openaccess, online journals, promising a paradigm shift from the current review, selection and dissemination processes in academic publishing. All Frontiers journals are driven by researchers for researchers; therefore, they constitute a service to the scholarly community. At the same time, the Frontiers journal series operates on a revolutionary invention, the tiered publishing system, initially addressing specific communities of scholars, and gradually climbing up to broader public understanding, thus serving the interests of the lay society, too. Dedication to qualityEach Frontiers article is a landmark of the highest quality, thanks to genuinely collaborative interactions between authors and review editors, who include some of the world's best academicians. Research must be certified by peers before entering a stream of knowledge that may eventually reach the public -and shape society; therefore, Frontiers only applies the most rigorous and unbiased reviews. Frontiers revolutionizes research publishing by freely delivering the most outstanding research, evaluated with no bias from both the academic and social point of view. By applying the most advanced information technologies, Frontiers is catapulting scholarly publishing into a new generation. What are Frontiers Research Topics?Frontiers Research Topics are very popular trademarks of the Frontiers journals series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area.

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“…A similar pattern of phylogeny branching was obtained for fungi of Ascomycota by Ghikas et al (2006), for selected Basidiomycota and Ascomycota by Aguileta et al (2016), for Pezizomycotina by Cardona et al (2018), and for Hypocreales by Wang et al (2017). Therefore, the combination of 14 mitochondrial gene set analyzed in this work may be a useful strategy for fungal taxa identi cation and phylogenetic analysis.…”

Section: Phylogenetic Analysessupporting

confidence: 82%

“…Phylogenetic analyses were performed using the 14 conserved mitochondrial genes of a database constructed with selected taxa from the Subphylum Pezizomycotina (Cardona et al 2018). In addition, three species of the Subphylum Saccharomycotina, as Candida albicans, Candida glabrata, and Wickerhamomyces canadensis were used as outgroups.…”

Section: Phylogenetic Analysesmentioning

confidence: 99%

Trichoderma Koningiopsis (Hypocreaceae) has the Smallest Mitogenome of the Genus Trichoderma

Castrillo

Bich

Zapata

et al. 2021

Preprint

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The complete mitochondrial genome sequence of the mycoparasitic fungus Trichoderma koningiopsis was determined using the Illumina next-generation sequencing technology. We used data from our recent Illumina NGS-based project of T. koningiopsis genome sequencing to study its mitochondrial genome. The mitogenome was assembled, annotated, and compared with other mitogenomes. Trichoderma koningiopsis strain POS7 mitogenome is a circular molecule of 27,560 bp long with a GC content of 27.70%. It harbours the whole complement of the 14 conserved mitochondrial protein-coding genes (PCG) such as atp6, atp8, atp9, cox1, cox2, cox3, cob, nad1, nad2, nad3, nad4, nad4L, nad5, and nad6, also found in other Hypocreales. The mitogenome also contains two ribosomal RNA genes and 26 transfer RNA genes (tRNAs), 5 of them with more than one copy. Other genes also present in the assembled mitochondrial genome are a small rRNA subunit and a large rRNA subunit containing ribosomal protein S3 gene. A phylogenetic analysis was done using the 14 PCGs genes of T. koningiopsis strain POS7 mitogenome to compare them with those from other fungi of the Subphyla Pezizomycotina and Saccharomycotina. T. koningiopsis strain POS7 was clustered together with other representatives of Trichoderma lineage, within the Hypocreales group, which is also supported by previous phylogenetic studies based on nuclear markers. The characterization of mitochondrial genome of T. koningiopsis contributes to the understanding of phylogeny and evolution of Hypocreales.

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Complete mitogenome of the biocontroller fungusPurpureocilliumsp. (Ascomycota, Ophiocordycipitaceae, Hypocreales)

Cited by 6 publications

References 4 publications

Characterization of Rhizosphere Microbial Communities for Disease Incidence and Optimized Concentration of Difenoconazole Fungicide for Controlling of Wheat Dwarf Bunt

Characterization of Rhizosphere Microbial Communities for Disease Incidence and Optimized Concentration of Difenoconazole Fungicide for Controlling of Wheat Dwarf Bunt

Community Series in Plants and Microbial Communities: Diversity, Pathogens and Biological Control, Volume II

Trichoderma Koningiopsis (Hypocreaceae) has the Smallest Mitogenome of the Genus Trichoderma

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