Complete mitogenome of the high ethanol production fungus<i>Fusarium oxysporum</i>Mh2-2

Zeng, Lu; Liu, Chichuan; Lin, Runmao; Kang, Xincong; Xie, Bingyan; Xiong, Xingyao

doi:10.1080/23802359.2017.1398601

Mitochondrial DNA Part B

2017

DOI: 10.1080/23802359.2017.1398601

|View full text |Cite

Complete mitogenome of the high ethanol production fungusFusarium oxysporumMh2-2

Lu Zeng

Chichuan Liu

Runmao Lin

et al.

Abstract: (2017) Complete mitogenome of the high ethanol production fungus Fusariumoxysporum Mh2-2, Mitochondrial DNA Part B, 2:2, 814-815,

Help me understand this report

Search citation statements

Order By: Relevance

Paper Sections

Select...

Citation Types

Supporting

Mentioning

Contrasting

Year Published

2021

2024

Publication Types

Select...

Article3

Relationship

Self Cite0

Independent3

Authors

Journals

Cited by 3 publications

References 16 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

Draft Genome Resource of Fusarium oxysporum f. sp. capsici, the Infectious Agent of Pepper Fusarium Wilt

Ping

Khan

et al. 2021

MPMI

View full text Add to dashboard Cite

Fusarium oxysporum f. sp. capsici is the specific pathogen of pepper Fusarium wilt, and causes a significant reduction in pepper yield. Its narrow host specificity has led to the concept of forma speciales. This interesting phenomenon has great potential and needs to be analyzed at the molecular level. In this study, we obtained the draft genome sequence of F. oxysporum f. sp. capsici, using the Oxford Nanopore sequencing technology. The long read-based assembly consisted of 34 contigs, with a total length of 54,516,562 bp. The contig N50 was 4,962,668 bp and the GC content was 47.6%. Our genome assembly of F. oxysporum f. sp. capsici provides a valuable resource for the study of pepper Fusarium wilt, and the comparative genomic study of F. oxysporum.

show abstract

Draft Genome Resource of Fusarium oxysporum f. sp. capsici, the Infectious Agent of Pepper Fusarium Wilt

Ping

Khan

et al. 2021

MPMI

View full text Add to dashboard Cite

show abstract

Full Issue PDF

2021

MPMI

View full text Add to dashboard Cite

show abstract

Assembly, Annotation, and Comparative Analysis of Mitochondrial Genomes in Trichoderma

Wang,

Yang

et al. 2024

IJMS

View full text Add to dashboard Cite

Trichoderma is a widely studied ascomycete fungal genus, including more than 400 species. However, genetic information on Trichoderma is limited, with most species reporting only DNA barcodes. Mitochondria possess their own distinct DNA that plays a pivotal role in molecular function and evolution. Here, we report 42 novel mitochondrial genomes (mitogenomes) combined with 18 published mitogenomes of Trichoderma. These circular mitogenomes exhibit sizes of 26,276–94,608 bp, typically comprising 15 core protein-coding genes (PCGs), 2 rRNAs, and 16–30 tRNAs; however, the number of endonucleases and hypothetical proteins encoded in the introns of PCGs increases with genome size enlargement. According to the result of phylogenetic analysis of the whole mitogenome, these strains diverged into six distinct evolutionary branches, supported by the phylogeny based on 2830 single-copy nuclear genes. Comparative analysis revealed that dynamic Trichoderma mitogenomes exhibited variations in genome size, gene number, GC content, tRNA copy, and intron across different branches. We identified three mutation hotspots near the regions encoding nad3, cox2, and nad5 that caused major changes in the mitogenomes. Evolutionary analysis revealed that atp9, cob, nad4L, nad5, and rps3 have been influenced by positive selection during evolution. This study provides a valuable resource for exploring the important roles of the genetic and evolutionary dynamics of Trichoderma mitogenome in the adaptive evolution of biocontrol fungi.

show abstract

scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.

Contact Info

customersupport@researchsolutions.com

10624 S. Eastern Ave., Ste. A-614

Henderson, NV 89052, USA

This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.

Blog Terms and Conditions API Terms Privacy Policy Contact Cookie Preferences Do Not Sell or Share My Personal Information

Made with 💙 for researchers

Part of the Research Solutions Family.

Complete mitogenome of the high ethanol production fungusFusarium oxysporumMh2-2

Abstract: (2017) Complete mitogenome of the high ethanol production fungus Fusariumoxysporum Mh2-2, Mitochondrial DNA Part B, 2:2, 814-815,

Cited by 3 publications

References 16 publications

Draft Genome Resource of Fusarium oxysporum f. sp. capsici, the Infectious Agent of Pepper Fusarium Wilt

Draft Genome Resource of Fusarium oxysporum f. sp. capsici, the Infectious Agent of Pepper Fusarium Wilt

Full Issue PDF

Assembly, Annotation, and Comparative Analysis of Mitochondrial Genomes in Trichoderma

Contact Info

Product

Resources

About