2003
DOI: 10.1016/s0022-2836(03)00894-5
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Complete Nucleotide Sequence of pHG1: A Ralstonia eutropha H16 Megaplasmid Encoding Key Enzymes of H2-based Lithoautotrophy and Anaerobiosis

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Cited by 166 publications
(166 citation statements)
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References 89 publications
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“…The ERGO software suite 46 (Integrated Genomics) was used in the first phase of this study to obtain a preliminary automated annotation. All annotations were edited manually using the GeneSOAP annotation workbench 14 written by one of us (R.C.) and custom Perl scripts written by another of us (F.R.).…”
Section: Methodsmentioning
confidence: 99%
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“…The ERGO software suite 46 (Integrated Genomics) was used in the first phase of this study to obtain a preliminary automated annotation. All annotations were edited manually using the GeneSOAP annotation workbench 14 written by one of us (R.C.) and custom Perl scripts written by another of us (F.R.).…”
Section: Methodsmentioning
confidence: 99%
“…Seven of these are located on megaplasmid pHG1. The latter also carries an extensive 'junkyard' region encompassing 39 remnants of transposases and phage-type integrases 14 . No comparable region was found on the chromosomes.…”
Section: Organization and General Features Of The Genomementioning
confidence: 99%
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“…Genetic studies with Tn5-induced phaP1 mutants demonstrated a significantly lower rate of PHB biosynthesis and the appearance of only one single large granule in the cells (Wieczorek et al, 1995). The three PhaP1 homologues PhaP2, PhaP3 and PhaP4 exhibit 42, 49 and 45 % identity or 61, 62 and 63 % similarity to PhaP1, respectively, (Schwartz et al, 2003) and occur in minor amounts in the cells (Pötter et al, 2004;Zeller et al, 2005). Due to their similarities, PhaP1 and PhaP3 are homologues, but may represent paralogues of PhaP2 and PhaP4.…”
Section: Introductionmentioning
confidence: 99%