Molecular clocks suggest that animals originated well before they first appear as macroscopic fossils, but geologic tests of these hypotheses have been elusive. A rare steroid hydrocarbon, 24-isopropylcholestane, has been hypothesized to be a biomarker for sponges or their immediate ancestors because of its relatively high abundance in pre-Ediacaran to Early Cambrian sedimentary rocks and oils. Biolipid precursors of this sterane have been reported to be prominent in several demosponges. Whether 24-isopropylcholestane can be interpreted as a sponge (and, hence, animal) biomarker, and so provide clues about early metazoan history, depends on an understanding of the distribution of sterol biosynthesis among animals and their protistan relatives. Accordingly, we characterized the sterol profile of the choanoflagellate Monosiga brevicollis, a representative of the unicellular sister group of animals. M. brevicollis does not produce a candidate sterol precursor for 24-isopropylcholestane under our experimental growth conditions. It does, however, produce a number of other sterols, and comparative genomics confirms its biosynthetic potential to produce the full suite of compounds recovered. Consistent with the phylogenetic position of choanoflagellates, the sterol profile and biosynthetic pathway of M. brevicollis display characteristics of both fungal and poriferan sterol biosynthesis. This is an example in which genomic and biochemical information have been used together to investigate the taxonomic specificity of a fossil biomarker.choanoflagellates ͉ molecular fossils ͉ origin of metazoans ͉ Monosiga brevicollis S terols constitute a diverse class of triterpenoid lipids having wide ranging importance in biology. All eukaryotes require sterols; they serve important functions because membrane lipids play roles as developmental regulators and precursors to steroid hormones in multicellular organisms. Recently, sterols have emerged as an important investigative tool for paleontologists (1-4) because steranes, the hydrocarbon skeletons of sterols, resist microbial attack and remain stable over long periods of time. Thus, they are well represented as molecular fossils in sedimentary rocks. The discovery of diverse steranes in the geologic record has fueled a search for unique precursor sterols in many branches of the eukaryotic tree, because for a molecular fossil to be useful as a biomarker, it must have significant taxonomic and/or physiological specificity.One candidate for a paleobiologically useful biomarker is 24-isopropylcholestane, the geologically stable derivative of the C 30 sterol 24-isopropylcholesterol. Although much of eukaryotic sterol diversity is manifested in double bonds and functional groups that do not preserve in fossil hydrocarbon skeletons, the isopropyl moiety in the side chain of 24-isopropylcholesterol and related sterols results in a structure that is both unique and preservable. Particularly abundant as a molecular fossil in rocks deposited during the Ediacaran and Cambrian periods (3, 5) i...