2018
DOI: 10.4208/cicp.oa-2017-0146
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Computational Software: Polymer Chain Generation for Coarse-Grained Models Using Radical-Like Polymerization

Abstract: This paper presents major improvements in the efficiency of the so-called Radical-Like Polymerization (RLP) algorithm proposed in "Polymer chain generation for coarse-grained models using radical-like polymerization" [J. Chem. Phys. 128 (2008)]. Three enhancements are detailed in this paper: (1) the capture radius of a radical is enlarged to increase the probability of finding a neighboring monomer; (2) between each growth step, equilibration is now performed with increasing the relaxation time depending on th… Show more

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Cited by 7 publications
(9 citation statements)
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“…All the molecular dynamics simulations are performed using the classic LAMMPS code . The copolymer chains are built using a radical-like polymerization algorithm (RLP) previously developed by Perez and co-workers. , The simulation is performed in the NPT ensemble, using periodic boundary conditions, at P = 0.5 ε u /σ u 3 and T = 4 ε u / k B . It starts from a bath containing two types of loner beads (SS and HS types).…”
Section: Methodsmentioning
confidence: 99%
“…All the molecular dynamics simulations are performed using the classic LAMMPS code . The copolymer chains are built using a radical-like polymerization algorithm (RLP) previously developed by Perez and co-workers. , The simulation is performed in the NPT ensemble, using periodic boundary conditions, at P = 0.5 ε u /σ u 3 and T = 4 ε u / k B . It starts from a bath containing two types of loner beads (SS and HS types).…”
Section: Methodsmentioning
confidence: 99%
“…At each growth step, each radical forms a bond with a new monomer and transfers the radical to the chosen monomer. At the end of the method, M chains of N units are formed (for details, see our previous work 40 ). The system is then equilibrated during 5 × 10 5 τ u at T = 3.3ϵ u /k B and P = 0.5ϵ u /σ u 3 in the NPT ensemble.…”
Section: Methodsmentioning
confidence: 99%
“…Polymer chains have been generated and equilibrated using the radical-like polymerization method. , This method starts with a LJ bath of N mon monomers, with M of them being radicals. At each growth step, each radical forms a bond with a new monomer and transfers the radical to the chosen monomer.…”
Section: Methodsmentioning
confidence: 99%
“…To generate these systems with target number of chains and chain length, the radical-like polymerization method , has been employed (see more details in Zhai et al , ). The systems are then equilibrated during 5.0 × 10 5 τ at a temperature of T = 3.3ϵ/ k B and pressure P = 0.5ϵ/σ 3 in the NPT ensemble.…”
Section: Methodsmentioning
confidence: 99%
“…where = , = 5.0 is the cutoff radius, LJ is an adjusted parameter of the potential that favours crystallization and crystal stability for the FENE-LJ model chosen here. We take LJ = 1.888 as proposed in our previous work, 24 To generate these systems with target number of chains and chain length, the Radical-Like Polymerization (RLP) method 57,58 has been employed (see more details in Zhai et al 25,58 ). The until the crystallization of each system saturates.…”
Section: It Needs To Be Clarified That Inmentioning
confidence: 99%