In this paper, we study a photonic Bragg waveguide sensor for resonant sensing applications in the THz range. In order to enhance the resolution and detectivity of the sensor, we modify the relatively broad transmission spectrum of the Bragg waveguide with spectrally narrow transmission dips by creating a geometrical defect in Bragg reflector and causing anti-crossing phenomenon between the core-guided mode and defect mode. The spectral position of the resonant dip is highly sensitive to the thickness variation in the vicinity of the waveguide core. By designing and manufacturing a Bragg waveguide which includes several sections with different defect layer thicknesses, we can interrogate more than one sample simultaneously and thereby realize multichannel resonant sensing by directly tracking the independent resonant dips. Furthermore, we demonstrate the waveguide platform for online monitoring of the thickness variation of lactose powders, which is captured on the waveguide core via a centrifugal force using a home-built rotating setup. Additionally, we also demonstrate the waveguide for fingerprint detection of powder analytes, which further enriches the sensing scenario of the sensing platform. Finally, we discuss the advantages and the spectral tailoring flexibility of the THz Bragg waveguides sensors for future implementations.