Since the discovery that KRAS exon 2 mutations predict a lack of benefit from antiepidermal growth factor receptor (EGFR) therapy in metastatic colorectal cancer, our understanding of RAS mutations has expanded considerably. Guidelines now suggest extended RAS characterization, which includes assessment of KRAS and NRAS for mutations at exon 2 (codons 12 and 13), exon 3 (codons 59 and 61), and exon 4 (codons 117 and 146).1 Extended RAS mutations appear to confer resistance to anti-EGFR therapy. With their inclusion, approximately 56% of patients will be defined as having a RAS mutation and will not be eligible for anti-EGFR therapy.2,3 In addition, atypical RAS mutations exist that are of unclear significance and difficult to study in any prospective manner given their rarity. Even within guideline-described codons there are mutations, such as KRAS A59T, that are of unclear significance. Studying these mutations individually would be nearly impossible, and they highlight a pressing issue of how we deal with variants of unknown significance (VUS). The number of uncommon VUS is likely to expand exponentially as clinical sequencing moves to more comprehensive sequencing platforms, and we will need solutions to deal with these variants.In this issue of JNCCN, Lou et al ("Therapeutic Response of Metastatic Colorectal Cancer Harboring a KRAS Missense Mutation After Combination Chemotherapy With the EGFR Inhibitor Panitumumab") present the case of a 50-year-old woman with a KRAS A59T-mutated metastatic colon cancer who received 4 cycles of FOLFIRI plus panitumumab and showed a radiographic partial response accompanied by a decline in carcinoembryonic antigen. The patient subsequently experienced disease control lasting 8 months while receiving FOLFIRI plus panitumumab. She was noted to have a KRAS A59T mutation after the treating institution changed from a Sanger sequencing platform specific to KRAS exon 2 to a more comprehensive amplicon-based next-generation sequencing (NGS) panel that included extended RAS coverage. The NGS panel was performed on DNA extracted from the same biopsy of the primary tumor as the Sanger sequencing. The authors propose that patients with KRAS A59T mutations may represent a population with continued sensitivity to anti-EGFR therapy.
Challenges and Opportunities in Studying Rare BiomarkersGiven the infrequency of many extended RAS mutations, they have not been well described individually and were considered as a group of mutations in the studies that support extended RAS mutation testing. Codon 59 mutations are particularly lacking in evidence to support their role in predicting resistance to anti-EGFR therapy. Only 7 patients with codon 59 mutations were described in the landmark PRIME trial analysis of extended RAS mutations, and these mutations were not part of the extended RAS mutation analysis. The evidence to support these mutations as a predictive marker was only the fact that removing these patients from the population with wild-type RAS resulted in a hazard ratio that made anti-EGF...