The organic food market has not reached its maturity yet in Malaysia. Consumers of organic food have increased in the last year. The development of organic food supply chain management shows substantial opportunities. Although it is only a small part of the food market, it gains the interest of consumers researchers and businessmen. Consumers became interested to know if the food they purchase is fully organic and what are the activities involved in the supply chain management of the organic food. This paper will discuss the factor that affects organic food supply chain management in Malaysia. In addition to that, the study discusses Malaysia’s policy in certifying organic food and standards. Also, the challenges facing food supply chain management. This paper will give a short review of the importance of organic food supply chain management in Malaysia which will give the reader a clear view of the standards and concepts of organic food in Malaysia.