A new species of Baetidae, Alainites siamensissp. nov., is described from Thailand. This new species is closely related to Alainites lingulatus Tong & Dudgeon, 2000, Alainites laetificus (Kang & Yang, 1994) and Alainites yixiani (Gui & Lu, 1999). Species delimitation based on morphological and molecular (mitochondrial COI sequences) evidence is provided. The discovery of this species confirms the wide distribution of Alainites Waltz & McCafferty, 1994 in Southeast Asia.