The two transmitter binding sites of the neuromuscular acetylcholine (ACh) receptor channel contain several aromatic residues, including a tryptophan located on the complementary, negative face of each binding pocket. These two residues, Trp-55 in the ⑀ subunit and Trp-57 in the ␦ subunit, were mutated (AEFHILRVY), and for most constructs the rate constants for acetylcholine binding and channel gating were estimated by using single channel kinetic analyses. The rate constants for unliganded channel opening and closing were also estimated for some mutants. From these measurements we calculated all of the equilibrium constants of the "allosteric" cycle as follows: diliganded gating, unliganded gating, dissociation from the C ( Acetylcholine receptor channels are allosteric proteins that "gate" the flow of ions at the vertebrate nerve-muscle synapse (1-3). As with other members of this five-subunit ("Cys loop") receptor family, the two AChR 2 agonist-binding sites are located in the extracellular domain of the protein, about 50 Å above the middle of the membrane. The occupancy of these sites by appropriate ligands alters the equilibrium constant for gating, which we define as the global and reversible isomerization of the protein between a stable, low affinity, nonconducting C conformation and a stable, high affinity, ion-conducting O conformation.Structures of the heteromeric Torpedo muscle-type AChR (4), the homomeric ELIC (5), GLIC (6), and acetylcholine-binding proteins (7,8) show that each ligand-binding site contains several aromatic residues that are mostly conserved among these pentameric receptors (Fig. 1). In AChRs, residues Tyr-93, are in the ␣ ⑀ or ␣ ␦ subunit (the positive face of the binding site), and residues Trp-55 and Trp-57 are in the complementary ⑀ or ␦ subunit (the negative face), respectively. The foci of this report are these two minusside tryptophan residues, which we will refer to as the W Ϫ amino acids.Affinity labeling studies of AChRs show that the two W Ϫ residues are located near the ACh-binding site and participate in the channel activation process. In Torpedo, ␥Trp-55 and ␦Trp-57 are sites of photo-incorporation of the competitive antagonist d-tubocurarine (9, 10), and ␥Trp-55 is labeled by the agonist nicotine (11). Also, constitutively active AChRs are formed following the incorporation of a series of tethered quaternary ammonium derivatives at ␣Trp-149, ␣Tyr-93, and ␥Trp-55/␦Trp-57 (12, 13). These experiments indicate that the W Ϫ residues are close to the agonist-binding site but more distant compared with ␣Trp-149 and ␣Tyr-93 (for which shorter tethers were effective). Structures of acetylcholine-binding protein confirm this conclusion; the minus-side residue Trp-53 makes limited aromatic contacts with bound ligand, whereas the plus-side aromatic residues Trp-143 and, to a lesser extent, , form the main part of an "aromatic box" (14) that surrounds the ligand (Fig. 1, right).To what extents do the W Ϫ side chains influence ligand binding and channel gating? In Torpedo AChRs, a...