Trifluoromethylated nucleosides, such as trifluridine, have widespread applications in pharmaceuticals as anticancer and antiviral agents. However, site‐selective addition of a trifluoromethyl group onto a nucleobase typically requires either inconvenient multi‐step synthesis or expensive trifluoromethylation reagents, or results in low yield. This article describes a simple, scalable, and high‐yielding protocol for late‐stage direct trifluoromethylation of pyrimidine nucleosides via a microwave‐irradiated pathway. First, 5‐iodo pyrimidine nucleosides undergo complete benzoylation to obtain N3‐benzoyl‐3',5'‐di‐O‐benzoyl‐5‐iodo‐pyrimidine nucleosides as key precursors. Next, trifluoromethylation is carried out under both conventional and microwave heating using an inexpensive and commercially accessible Chen's reagent, i.e., methyl fluorosulfonyldifluoroacetate, to produce N3‐benzoyl‐3',5'‐di‐Obenzoyl‐5‐trifluoromethyl‐pyrimidine nucleosides. The microwave‐assisted transformation accentuates its simplicity, mild reaction conditions, and dominance, providing a facile route to access trifluoromethylation. Finally, the envisioned 5‐trifluoromethyl pyrimidine nucleosides are obtained by a routine debenzoylation procedure. This concludes a convenient three‐step synthesis to obtain trifluridine and its 2'‐modified analogs on a gram scale with consistently high yields, starting from their respective iodo‐precursors, and requires only one chromatographic purification at the trifluoromethylation step. Furthermore, this operationally simple protocol can be utilized as a definitive methodology to produce various other trifluoromethylated therapeutics. © 2021 Wiley Periodicals LLC.
Basic Protocol: Synthesis of 5‐trifluoromethyl pyrimidine nucleosides 4a‐c
Alternate Protocol: Conventional trifluoromethylation: Synthesis of N3‐benzoyl‐3',5'‐di‐O‐benzoyl‐5‐trifluoromethyl pyrimidine nucleosides (3a‐c)