Covalent immobilization of DNA on diamond and its verification by diffuse reflectance infrared spectroscopy

Ushizawa, Koichi; Sato, Yoichiro; Mitsumori, Takeshi; Machinami, Tomoya; Ueda, Toyotoshi; Ando, Toshihiro

doi:10.1016/s0009-2614(01)01362-8

Cited by 213 publications

(160 citation statements)

References 13 publications

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“…The diamonds were processed using strong acid reflux and ultrasonication 31,32 , as outlined below. The preparation of the nanodiamonds included a number of previously reported methods 31,32 , and was modified for optimal deagglomeration. It is worth mentioning that thermal oxidation can yield disperse sub-10-nm nanodiamond crystals on lacey carbon, as reported previously 28 .…”

Section: Methodsmentioning

confidence: 99%

Observation and control of blinking nitrogen-vacancy centres in discrete nanodiamonds

et al. 2010

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Nitrogen-vacancy colour centres in diamond can undergo strong, spin-sensitive optical transitions under ambient conditions, which makes them attractive for applications in quantum optics 1 , nanoscale magnetometry 2,3 and biolabelling 4 . Although nitrogen-vacancy centres have been observed in aggregated detonation nanodiamonds 5 and milled nanodiamonds 6 , they have not been observed in very small isolated nanodiamonds 7 . Here, we report the first direct observation of nitrogen-vacancy centres in discrete 5-nm nanodiamonds at room temperature, including evidence for intermittency in the luminescence (blinking) from the nanodiamonds. We also show that it is possible to control this blinking by modifying the surface of the nanodiamonds.Detonation nanodiamond is routinely produced on an industrial scale, and the raw material can be disintegrated into a stable 5-nm monodisperse colloid 8 . The combination of inert core and chemically reactive surface, which can host a variety of moieties, is appealing for chemists, biologists and material scientists 9,10 . Quantum magnetometry 2,3 is an example of an emerging technology that will directly benefit from the availability of nanocrystals with welldefined sizes in the 5-nm range, because the sensitivity to single spins is inversely proportional to the cube of the distance between the sensor (that is, the nitrogen-vacancy (NV) centre) and the spin being detected.Producing and detecting NV colour centres in isolated 5-nm detonation nanodiamond has been controversial, and there has been some scepticism regarding their stability as a useful emitter in a discrete crystal. For example, theoretical calculations of the crystal energy budget favour the location of nitrogen on the surface rather than in the core, which seems to explain the limited observation of NV centres in chemical vapour deposition and high-pressure high-temperature grains of less than 40 nm in size 11,12 , and favours the prediction that nanodiamonds smaller than 10 nm in size do not contain NV centres 7,13 . Although sub-10-nm nanodiamonds with NV centres have been produced using a top-down approach (milling luminescent high-pressure hightemperature microdiamonds into 7-nm particles 6,14 ), the question of NV stability in isolated detonation nanodiamonds persists.In aggregated detonation nanodiamonds (agglomerates and agglutinates 8 ), high-sensitivity, time-gated luminescence and electronic paramagnetic resonance spectroscopy have been used to extract a weak NV signal from a strong luminescence background 5 . The experiments highlight the eclipsing nature of the graphitic surface layers in nanodiamond aggregates-NV centres were simply not visible through the broadband luminescence from the surface and grain boundary material. To distinguish the NV spectral signature from the large grain boundary luminescence overhead, diamond synthesis yielding discrete sub-10-nm detonation nanodiamonds is vital. Here, we use a robust deaggregation and dispersion method, which diminishes the crystal-crystal interaction to...

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Section: Methodsmentioning

confidence: 99%

Observation and control of blinking nitrogen-vacancy centres in discrete nanodiamonds

et al. 2010

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“…Acid treatments: Hydrogen plasma treatment (Thoms et al 1994;Strother et al 2002;Knickerbocker et al 2003) -Nitric and sulphuric acid (Kong et al 2005a;Huang and Chang 2004;Liu et al 2008;Chao et al 2007;Ushizawa et al 2002) Annealing in hydrogen gas (Härtl et al 2004;Christiaens et al 2006;Saini et al 2008) -Nitric acid Huang et al 2008;Sushchev et al 2008;Mitev et al 2007) Water vapour treatment (Ando et al 1996a) -Hydrochloric acid (Kossovsky et al 1995;Mitev et al 2007) Borane (BH3) (Krüger et al 2006;Neugart et al 2007;Liang et al 2009;Zhang et al 2009b) -Perchloric acid (Xu et al 2005) -Potassium dichromate and sulphuric acid (Mitev et al 2007) -Sulfuric acid and potassium permanganate (Xu et al 2005) Annealing in:…”

Section: Oxidation/carboxylation Reductionmentioning

confidence: 99%

“…In one study, the application of nanodiamonds to the skin of mice did not cause contact hypersensitivity or other allergic reactions (Burleson et al 2009). At a dose of 1mg/kg, Other -DNA (Christiaens et al 2006;Takahashi et al 2003;Knickerbocker et al 2003;Lu et al 2004;Rezek et al 2006;Yang et al 2002) -DNA (Ushizawa et al 2002) (ester linkage) Table 6 Cells showing good biocompatibility with nanodiamond in vitro HeLa cells (human cervical carcinoma) (Faklaris et al 2008;Vaijayanthimala et al 2009) Human lung adenocarcinoma cells Liu et al 2007;Liu et al 2009) Keratinocytes (Burleson et al 2009;Schrand et al 2007) Neuroblastomas (Schrand et al 2007) PC-12 cells (Schrand et al 2007) Lung fibroblasts Embryonic fibroblasts Vaijayanthimala et al 2009) Human kidney cells Osteoprogenitor cells (Vaijayanthimala et al 2009) Macrophages (Schrand et al 2007) 4 nm nanodiamonds instilled into the mouse trachea were phagocytosed by alveolar macrophages within 24 h, with a decrease in the number of nanodiamonds observed in the alveolar area throughout the study. Histopathological and ultrastructural investigations at 7, 14 and 28 days postexposure also showed no adverse effects in the lungs; nor did nanodiamonds evidently translocate into the bloodstream and/or other organs (Yuan et al 2010).…”

Section: Bio-compatibility Of Nanodiamondmentioning

confidence: 99%

Luminescent nanodiamonds for biomedical applications

et al. 2011

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In recent years, nanodiamonds have emerged from primarily an industrial and mechanical applications base, to potentially underpinning sophisticated new technologies in biomedical and quantum science. Nanodiamonds are relatively inexpensive, biocompatible, easy to surface functionalise and optically stable. This combination of physical properties are ideally suited to biological applications, including intracellular labelling and tracking, extracellular drug delivery and adsorptive detection of bioactive molecules. Here we describe some of the methods and challenges for processing nanodiamond materials, detection schemes and some of the leading applications currently under investigation.

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“…Linking moieties to a diamond surface for biotechnology applications was reported in the past, such as the early work by Ushizawa et al, in which DNA was covalently linked to oxidized diamond surfaces [25]. In a similar strategy, we covalently linked conventional matrices and active moieties to the surface of detonated ND.…”

Section: Introductionmentioning

confidence: 99%

The Development of Novel Nanodiamond Based MALDI Matrices for the Analysis of Small Organic Pharmaceuticals

Chitanda

Zhang

Pahl

et al. 2016

J. Am. Soc. Mass Spectrom.

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Abstract. The utility of novel functionalized nanodiamonds (NDs) as matrices for matrix-assisted laser desorption ionization-mass spectrometry (MALDI-MS) is described herein. MALDI-MS analysis of small organic compounds (<1000 Da) is typically complex because of interferences from numerous cluster ions formed when using conventional matrices. To expand the use of MALDI for the analysis of small molecules, novel matrices were designed by covalently linking conventional matrices (or a lysine moiety) to detonated NDs. Four new functionalized NDs were evaluated for their ionization capabilities using five pharmaceuticals with varying molecular structures. Two ND matrices were able to ionize all tested pharmaceuticals in the negative ion mode, producing the deprotonated ions [M -H] -. Ion intensity for target analytes was generally strong with enhanced signal-to-noise ratios compared with conventional matrices. The negative ion mode is of great importance for biological samples as interference from endogenous compounds is inherently minimized in the negative ion mode. Since the molecular structures of the tested pharmaceuticals did not suggest that negative ion mode would be preferable, this result magnifies the importance of these findings. On the other hand, conventional matrices primarily facilitated the ionization as expected in the positive ion mode, producing either the protonated molecules [M + H] + or cationic adducts (typically producing complex spectra with numerous adduct peaks). The data presented in this study suggests that these matrices may offer advantages for the analysis of low molecular weight pharmaceuticals/metabolites.

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Covalent immobilization of DNA on diamond and its verification by diffuse reflectance infrared spectroscopy

Cited by 213 publications

References 13 publications

Observation and control of blinking nitrogen-vacancy centres in discrete nanodiamonds

Observation and control of blinking nitrogen-vacancy centres in discrete nanodiamonds

Luminescent nanodiamonds for biomedical applications

The Development of Novel Nanodiamond Based MALDI Matrices for the Analysis of Small Organic Pharmaceuticals

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