We develop the calculation of the divergent part of one-loop covariant effective action for scalar fields minimally and non-minimally coupled to gravity using the generalized Schwinger-DeWitt technique. We derive the field-space metric using Vilkovisky's prescription and obtain new terms in the one-loop corrections which are absent in past literatures with trivial choices of field-space metric. We obtain the covariant versions of past non-covariant results by using Barvinsky and Vilkovisky's extension to the ordinary Schwinger-DeWitt approach. For completeness, we study the one-loop gravitational corrections for a dilaton-extended two-field Starobinsky model and compare with known results.