This study determined the function of thioredoxin and glutaredoxin systems in the phytopathogenic fungus via analyzing mutants obtained from the targeted deletion of genes encoding thioredoxin peroxidase (), thioredoxin reductase (), and glutathione reductase (). and, but not , are required for growth and conidiation. The reduced growth and conidiation seen in the or deletion mutant can be restored by glutathione. Deletion mutants showing growth inhibition by oxidants are defective for HO detoxification and induce smaller lesions on citrus leaves. and, but not , also contribute to NaCl resistance. is required for sorbitol resistance and is responsible for resistance to mancozeb and boscalid but not chlorothalonil fungicides, a novel phenotype that has not been reported in fungi. is required for resistance to boscalid and chlorothalonil fungicides but confers susceptibility to mancozeb. The deletion mutant displays wild-type sensitivity to the tested fungicides. The expression of and is regulated by the oxidative stress responsive regulators Yap1, Hog1, and Skn7. The expression of , but not, is also regulated indirectly by the NADPH oxidase. The results indicate that the capability to resist oxidative stress is required for virulence of The thioredoxin and glutaredoxin systems are important thiol antioxidant systems in cells, and knowledge of these two systems in the plant-pathogenic fungus is useful for finding new strategies to reduce the virulence of this pathogen. In this study, we demonstrated that thiol antioxidant system-related genes (, , and) are required for HO detoxification and virulence in Moreover, deletion of results in hypersensitivity to the fungicides chlorothalonil and boscalid, and deletion mutants are highly sensitive to mancozeb, which is the fungicide mostly used in citrus fields. Therefore, our findings demonstrate that the ability to detoxify reactive oxygen species (ROS) plays a critical role in pathogenesis on citrus and provide novel insights into the physiological functions of thiol-containing systems in fungicide sensitivity for.