Tiger nuts (Cyperus esculentus L.) have been widely cultivated as a bioenergy crop in northern China. The value of tubers is receiving special attention, but the lack of information on how organs of tiger nuts coordinate resources to adapt to arid environments has limited the potential tuber production and diverse use. To address this knowledge gap, we experimented in the Ulan Buh Desert, Inner Mongolia (106° 33′ 28″ E, 40° 27′ 32″ N). Three fertilizer treatments were applied: zero fertilizer (N:P = 0:0), traditional fertilizer (N:P = 15:15), and additional nitrogen fertilizer (N:P = 60:15). Investigations were conducted at seedling, rhizome production, tuber formation, and tuber maturation stages. The results showed that under zero fertilizer, tiger nuts allocated biomass predominantly to propagative organs, namely rhizomes and tubers. However, an increase in leaf area or root surface area would necessitate more investment in leaf or root dry mass, resulting in diminishing returns. For biomass allocation, tiger nut responded the same way to traditional fertilizer treatment and zero fertilizer treatment, but the tuber number and yield increase under traditional fertilizer application. Additional nitrogen fertilizer stimulated shoot production through accelerated rhizome production aided by leaf area increasing. Fertilizer application can significantly increase both the number of tiger nuts and tuber yield. Nitrogen addition positively influenced aboveground biomass and enhanced rhizome tillering. Strong adaptability of tiger nuts makes the plant a suitable pioneer crop for developing marginal lands. The robust aboveground growth after nitrogen application enhances suitability for pasture utilization.