This article describes the first detailed analysis of mitochondrial electron transfer and oxidative phosphorylation in the pathogenic filamentous fungus, Gaeumannomyces graminis var. tritici. While oxygen consumption was cyanide insensitive, inhibition occurred following treatment with complex III inhibitors and the alternative oxidase inhibitor, salicylhydroxamic acid (SHAM). Similarly, maintenance of a ⌬ across the mitochondrial inner membrane was unaffected by cyanide but sensitive to antimycin A and SHAM when succinate was added as the respiratory substrate. As a result, ATP synthesis through complex V was demonstrated to be sensitive to these two inhibitors but not to cyanide. Analysis of the cytochrome content of mitochondria indicated the presence of those cytochromes normally associated with electron transport in eukaryotic mitochondria together with a third, b-type heme, exhibiting a dithionite-reduced absorbance maxima at 560 nm and not associated with complex III. Antibodies raised to plant alternative oxidase detected the presence of both the monomeric and dimeric forms of this oxidase. Overall this study demonstrates that a novel respiratory chain utilizing the terminal oxidases, cytochrome c oxidase and alternative oxidase, are present and constitutively active in electron transfer in G. graminis tritici. These results are discussed in relation to current understanding of fungal electron transfer and to the possible contribution of alternative redox centers in ATP synthesis.Under aerobic conditions, respiration of carbon metabolites in animal, plant, and fungal cells occurs in a tightly regulated manner to produce carbon dioxide and water. Transfer of the electron pairs associated with the respiration of carbon metabolites is indirect and complex, involving the reduction of the coenzymes NADϩ and FAD at two sites within glycolysis and four sites within the citric acid cycle. The electrons (associated with NADH and FADH 2 ) are subsequently transferred, via at least four distinct sites, into the electron-transport chain, where a series of reduction and oxidation events occur in a sequential manner at approximately 10 different redox centers.In the classical scheme, these redox centers are composed of a series of cytochromes and iron-sulfur complexes. About half the energy generated is lost as heat. The remaining energy generated by the electron flow is utilized in the translocation of hydrogen ions from the mitochondrial matrix to the inter mitochondrial membrane space. The free energy is thus stored in the proton gradient (proton motive force) and is subsequently used to drive the synthesis of ATP.While in mammalian systems the components and sequence of events associated with electron transport appear tightly conserved, those of plants and fungi appear more complex and diverse in nature, often involving alternative redox centers and pathways. Significant research has been conducted in the area of plant respiration, leading to the characterization of these alternative systems, but research into fun...