We designed and constructed a controllable inducing lysis system in Synechocystis sp. PCC 6803 to facilitate extracting lipids for biofuel production. Several bacteriophage-derived lysis genes were integrated into the genome and placed downstream of a nickel-inducible signal transduction system. We applied 3 strategies: (i) directly using the phage lysis cassette, (ii) constitutively expressing endolysin genes while restricting holin genes, and (iii) combining lysis genes from different phages. Significant autolysis was induced in the Synechocystis sp. PCC 6803 cells with this system by the addition of NiSO4. Our inducible cyanobacterial lysing system eliminates the need for mechanical or chemical cell breakage and could facilitate recovery of biofuel from cyanobacteria.biofuel ͉ phage lysis genes P hotosynthetic microorganisms, including eukaryotic algae and cyanobacteria, are being optimized to overproduce numerous products of value (1). Because of the global energy shortage and climate change caused by greenhouse gas emission, the scientific community has focused on developing renewable biofuels from photosynthetic microorganisms (2). Cyanobacteria are excellent organisms for biofuel production. Unlike algae, their genomes are relatively easy to manipulate. They are efficient at converting solar energy, and, unlike energy crops, they can be grown on non-arable land (3). We thus have selected Cyanobacterium Synechocystis sp. PCC 6803 (hereafter referred to as Synechocystis 6803) as a model organism to develop methods for easy recovery of lipids for use in biofuel production.The first goal of our research was to disrupt the cyanobacterial cell envelope to facilitate lipid recovery from biomass. Seog et al. (4) used various methods, such as sonication, French press, bead-beater, and lyophilization, to disrupt the cell envelops of the alga Botryococcus braunii. Extraction was 1.96 times more efficient using the bead-beater method than by using solvents alone, suggesting that a proper method of cell disruption could facilitate lipid extraction by damaging the cell wall. However, the bead-beater method is not economical for large amounts of biomass. There are some alternative cell-breakage methods, e.g., pulsed electric field (5) and hydrolytic enzymes (6), but all these methods add additional cost and reduce the overall utility of the process. Our strategy is simply to make the cyanobacteria lyse at the appropriate time.The cyanobacterial cell envelope is composed of 4 layers (7) (Fig. 1): the external surface layers (such as S-layers and carbohydrate structures), the outer membrane, the polypeptidoglycan layer (8), and the cytoplasmic membrane. Despite the overall gram-negative structure, the peptidoglycan layer found in cyanobacteria is considerably thicker than that of most gramnegative bacteria (8). In addition, the degree of crosslinking between the peptidoglycan chains within the cell wall layer of cyanobacteria (56-63%) is far higher than that in most gramnegative bacteria (20-33%) (9).To break up the pepti...