The diversity of neuronal morphologies and the complexity of synaptic connections in the mammalian brain provide striking examples of cell polarity. Over the past decade, the identification of the PAR (for partitioningdefective) proteins, their function in polarity in the Caenorhabditis elegans zygote, and the conservation of polarity proteins related to the PAR polarity complex in Drosophila and vertebrates, kindled intense interest in polarity pathways. Although the existence of a conserved polarity protein complex does not prove that these proteins function the same way in different systems, the emergence of an evolutionarily conserved mechanism that regulates cell polarity provides an exciting opportunity to define the role of polarity proteins in the generation of the diverse array of cell types and patterns of connections in the developing mammalian brain. This review addresses emerging genetic, molecular genetic, biochemical, and cell biological approaches and mechanisms that control neuronal polarity, focusing on recent studies using the neonatal cerebellum and hippocampus as model systems.The Caenorhabditis elegans embryo is a model system for studying cell polarity. Three PAR (for partitioningdefective) polarity proteins localize in the anterior cortex of the one-cell embryo: PAR-3, which contains three PDZ domains; PAR-6, which contains a single PDZ domain and a G-protein-binding, CRIB-like domain; and PKC-3, an atypical protein kinase C (abbreviated as aPKC, PKC). In Drosophila, homologs of the C. elegans PAR proteins are essential for the emergence of cellularity, and for asymmetric division of neuroblasts ( Many features of intercellular junctions are conserved across species from yeast to vertebrates. The apical junction in yeast shares common features with the Drosophila zonula adherens (ZA) junction and ZA junctions of mammalian epithelia, including a band of actin, the transmembrane adhesion proteins, and associated cytoplasmic proteins such as -catenin. Polarity proteins that establish the polarity of intercellular junctions of Drosophila epithelia are related to vertebrate polarity proteins that generate intercellular junctions in increasingly complex, multilayered vertebrate epithelia (Fig. 1). In mammalian epithelia, the first step in epithelial cell polarization is the formation of adhesion junctions between cells. Two classes of transmembrane adhesion proteins, cadherins and nectins, initiate adhesions between epithelial cells. Aggregation of adhesion sites leads to the recruitment of cytoskeletal proteins; the association of the intracellular domains of cadherins and nectin activates the Cdc42 and Rac GTPase pathways. After the adherens junction forms, a second adhesion site forms at the apical side of the cell, which becomes a tight junction. In polarized mammalian epithelial cells, the conserved polarity proteins PAR-3/ASIP, PAR-6, and aPKC localize to the tight junction. Recent studies suggest that Par3 and Par6/aPKC form complexes with other polarity proteins as well (Gao and Macara...