RNP AR is an operational procedure that uses the aircraft’s airborne navigation equipment and global positioning system to guide the aircraft to take off and land, and it is an effective means to ensure the flight safety of civil aircraft at high-plateau environments. In this paper, a three-dimensional, precise guidance command generation method for performing an RNP AR approach procedure is proposed. The lateral navigation transition paths between different segments are constructed, and a lateral segment switching strategy based on the angular bisector is introduced. To illustrate the availability of the proposed algorithm, a simulation based on the RNP AR approach procedure of Jiuzhai Huanglong Airport is operated, and it can be drawn from the results that the proposed algorithms can provide lateral and vertical guidance capabilities that meet the requirements of RNP AR approach.